Poeciliopsis prolifica (blackstripe livebearer): 129366204
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Entry
129366204 CDS
T09758
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129366204 (smarcad1a)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129366204 (smarcad1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HHH_3
UBA_8
TAP_C
UBA_N4BP1_C
Pyr_excise
UBA_4
T2SSK
Motif
Other DBs
NCBI-GeneID:
129366204
NCBI-ProteinID:
XP_054895896
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSMFNLDRFRFEKKGANKDPGCVSKSPDSEKENEPAQMKSRKATPKSHTRGVVFEEVISI
DLEEDDVMAEPNTKIQLTTKNKSSVQKLPKYVSPLHTDDEDEDMDEKKRKLLELFPQLPR
TEVMEICGSTSTLEGAIAACLLKFQDKEGLNDGKKRKQDESSCSQDSVDIQPSKKRKPSL
VSDEEGEGDEPSWEKQEAMVRKLQKRFPDQDKEELRMVLQEHNWDVEEALQVLQMFSESD
NSGTSLTISKEQNSNDKAESTRNYSEDNSETDRMSTDDTEDSSADSDNSEKTKRNQMSIR
DYKDSKVQKSTERKREAHHGDPKDHRDVDKADGSSTDNTKDSEDESNLEDIKVSKINSSI
HTMHSRIALSCSRMQTSTSSTSMPPPSSSASQVLSKFSSDTGLAKKQAAERKKKAQATQE
QVSSEDEEDTVTSEFEDSDDEVESITAKKDVKDEMLAFFQDATIDELSLISGCSVKKAQR
IVELRPFNSWESLWDVFHKGNGLSDDLMHGCKVVLKERKVILGLMSKCQTISIKMVQRVT
EVMERGTGSTKQPSLLNSQLQLKPYQLIGLKWLMLLNEHKLSGILADEMGLGKTIQAIAF
LAQLYENGIEGPHLVTVPSSTLDNWVRELRLWCPALEVLIYYGSVEERRYLKHDILNGEV
HFNVIVTTYSLAIGNDSDRSLFRKLPIKYAIFDEGHMLKNMNTLRYRHLMAINAEHRLLL
TGTPLQNNLLELMSLLNFIMPTMFSSSTMQLSKMFSMKSHEEQSRFERDRITQAKLIMKP
FILRRVKNEVLKQLPAKEEKIEFCSMSEKQQVLYEALLKKLKSTTIGEKRELCNVMMQLR
KMANHPLLHRQYYTTEKLKAMSKLMLKEPTHHDASAALIQEDMEVMSDFELHRLCQQYSS
ISSFQLDTSLLLDSGKFVHLKELLASLKSQGDRVVLFSQFTMMLDIVEVLLKHLQHRYVR
LDGSTPIADRIVLIDEYNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDYNPYNDKQA
EDRCHRVGQTRTVQVIKLISKDSIEDCILQLGQKKLKLEQDMTAADQDDEGSIPEDVASL
LKASLGL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttcaatctggaccgctttcggttcgagaagaagggagcaaacaaagatcca
ggttgcgtgtccaaaagtccggattctgaaaaggagaacgagccagctcagatgaaatca
cgtaaagccacgccaaagtcccacacccgtggtgtggtttttgaagaagtcatttccata
gatttggaggaagatgatgtcatggccgagccaaacacaaaaatacaactgaccacaaag
aacaaaagctcagttcagaagctaccaaaatatgtatcgccactacatacagatgatgag
gatgaggacatggatgaaaagaaaagaaaactattggaattgttccctcaattaccaaga
actgaagtgatggagatctgtgggagtacaagcacattggagggtgctatagctgcctgc
cttttaaaatttcaggacaaagaaggtctaaatgatggtaagaagagaaagcaggatgag
tccagctgttctcaggacagtgttgatattcaaccgagtaaaaaacgaaaaccgtctttg
gtctctgatgaagagggcgaaggggacgaaccaagctgggaaaagcaggaggccatggtg
agaaaactccagaaacggtttccggaccaggacaaagaggagttgaggatggtgcttcag
gagcacaactgggatgtggaagaagctctgcaggttcttcagatgttctcagaatcagat
aatagtggcaccagcttgactatttcaaaagagcagaactcaaatgacaaagctgaatca
accaggaactactcagaggacaacagtgaaacagataggatgagtaccgatgatacagaa
gacagttctgctgactctgataattcagaaaaaacaaaaaggaatcaaatgtcaatcaga
gattacaaagactcaaaggttcagaagtctactgaaagaaaaagagaagcacatcatggg
gatcctaaagaccacagagacgttgataaagcagatgggagcagtacagataatacaaag
gacagtgaggacgagtcgaacctggaggacataaaagtctccaaaattaatagcagcatt
catactatgcactcacggattgcgttatcatgctctcgtatgcaaacctctacttcctcc
acctcgatgcctccgccttcctcttcagcctcccaggttttgtccaagttttctagcgac
acaggactcgcaaagaagcaggcggcggagagaaagaagaaggcacaagctactcaagaa
caagtcagttctgaagatgaagaggacacagtaacaagcgagtttgaggactctgacgac
gaggtggagagcatcactgccaagaaggatgtgaaagatgaaatgcttgcgttttttcag
gatgcaacaatagacgaactgtcgctgatttctggctgttctgttaaaaaggcccagagg
atcgtggaactgagaccctttaatagctgggaatccctgtgggatgtcttccacaaggga
aacggactttcagacgatttgatgcacggctgcaaggtcgtcctcaaagagaggaaggtt
atccttggacttatgtctaaatgtcagacaatttctataaaaatggtgcaacgggtcaca
gaggtgatggagagagggactggctcaacaaaacagcccagtttacttaacagccaattg
cagctcaaaccgtatcagctgattggcctaaagtggcttatgcttctgaatgaacacaaa
ctgagtggcatccttgctgatgaaatgggtttggggaaaaccatccaggctatagcattt
cttgctcagctgtatgagaacggaatagaaggtcctcatctcgtcactgtgccttcatcc
acactggataattgggttcgagagctgaggctgtggtgccctgctcttgaagttcttatt
tattatggctctgtggaagagcgacgctacctgaaacacgacatcctcaatggggaagtc
catttcaacgtgattgtgacgacatatagcttggccatagggaacgacagcgatcggtct
ctttttcgtaagctgcctatcaaatatgccatctttgatgaaggtcacatgttaaagaac
atgaacacgctgcgctaccgccacctaatggccattaatgctgagcatcgcctcctgctg
acaggaactcctttacaaaacaacctattagagctgatgtcgctgttgaatttcataatg
cctaccatgttctccagctccacaatgcagctctccaagatgttttctatgaaatctcac
gaggaacaaagtcgattcgagagggatcgaattactcaagccaaactcatcatgaaaccc
tttatcttgcgacgagtcaaaaatgaggttctcaagcagcttccggccaaagaagaaaag
atcgagttctgctccatgagtgagaaacagcaggttctctacgaagcgctgctgaagaaa
ctaaagagtaccactattggagagaagcgtgagctgtgcaatgtgatgatgcagctgagg
aagatggccaaccatcctcttcttcacagacagtactacaccacagaaaagcttaaggct
atgagcaaacttatgctcaaggagccaacccaccatgatgccagtgctgctctgattcag
gaagacatggaggtgatgtcagattttgagctccatcgtctgtgtcagcagtattcctcc
atcagctccttccagctcgacacaagtctccttctcgactctgggaaattcgtccaccta
aaagagctgctggcctctctaaaaagccagggagacagagtggtgctattcagtcagttt
accatgatgttggacatcgtggaagttctcctgaaacatctacagcatcgttacgtcaga
ctggacggatccactcctattgctgacaggatcgttttgattgatgagtacaacacagac
caagacatattcgtgttcctgttatcgacccgtgctggagggctcggcatcaacctcacc
tctgcgaacgttgtcatcctacacgatatcgactacaatccctacaacgacaaacaggca
gaggatagatgtcatcgcgtggggcagaccaggactgtacaggtgataaagctgatcagt
aaggacagcatagaggactgcatcctgcagctcggtcagaagaagctaaagctggaacag
gacatgactgctgctgaccaagatgatgaaggaagcattcctgaagatgtggcctcttta
ctcaaagcctctctgggtctgtga
DBGET
integrated database retrieval system
