Poeciliopsis prolifica (blackstripe livebearer): 129366264
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Entry
129366264 CDS
T09758
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129366264 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129366264 (polb)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129366264 (polb)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
129366264 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129366264 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_2
NTP_transf_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
129366264
NCBI-ProteinID:
XP_054895984
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLDDLKKVEHKLNHHQKIGLKYFEEFEKRIPRAEMEKMEVLILGELKKIGPEYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESIGFVTDTLSKGDTKFMGVCQ
LQDTDDDEEEHLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGMAGEPLLVDSERDIFEYIQYRYREPKDRSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagctccacaggagtccctaaacgagggaataactgactttcttgtc
gaactggctaactacgagaaaaatgtcaacagggcaatacataagtacaatgcatacagg
aaagcagcatccactattgctaagtatcctaacaagattaaaagtggagaagaggcgaag
aaactggatggagttggtgctaaaatagctgaaaagatcgatgagttcttgcaaactgga
aaacttagaaaacttgaaaagatcagaaatgacgacaccagctcttccataaatttcctc
accagagtcactggaatcgggcctgctgctgctaggaagttttttgaagagggggtgaag
acactggatgatttgaagaaggtagagcacaagctaaatcaccaccaaaagattggactc
aagtactttgaagaatttgagaaaaggatcccaagagctgaaatggaaaagatggaggtt
cttattctgggggaattaaagaaaattggtccagaatatattggaacaatctgtggaagc
tataggagaggtgcagcatcgagtggtgatattgatattttattgactcacccaaattac
acttctcaaacagagaagcagccaaagcttcttcatgctgtggtcgatcatttggagtcc
attgggtttgtgaccgacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcaggacactgatgatgacgaggaagaacatcttcacaggcgcattgatattaggtta
attcccaaggaccagtactactgtggagttctgtatttcactggaagtgacatctttaat
aagaacatgaggactcatgctctggagaagggcttcactctgaacgagtacaccatcagg
ccacttggtgtcactggaatggcgggagagcctctgttggtggacagtgagagagacatc
tttgaatacatccagtacagatacagagagccgaaagatcgcagcgagtga
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integrated database retrieval system
