Poeciliopsis prolifica (blackstripe livebearer): 129366297
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Entry
129366297 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129366297
Enzymes [BR:
pprl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
129366297
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129366297
Prokaryotic type
129366297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
129366297
NCBI-ProteinID:
XP_054896025
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MFKSRPLLSALFNYRLLEKKRXVXSSCAMSEEARDQETAKLLKRENEVNEDSAERATKRT
KAEGEHNEDDKRYPKKKVVLLLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPG
NHGDDMRKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINENLPPQIRVLGLKRVTQ
GFNSKNNCDARTYAYMLPTVAFSPKHYDTENIAAFRLEAETLQKVNQLFALYKGTHNFHN
FTSQKAPSDPSARRYITEMSCGEPFVCNNHEFAVITVRGQSFMMHQIRKMIGLVIAVIKG
YAKEEVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWDREEEAIKA
FKEAHIYPTIVETECEEGSMISWMATLPIHDFEATVTGTQDNKDQKQENADEGNDSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatcccgaccactgttaagtgccttatttaactacagactgttagagaaaaaa
cggtaggtttaaagttcttgtgcaatgagtgaagaagccagagatcaagagacagccaag
ctgttaaaaagggaaaatgaggtgaatgaggactcagctgagagagccactaagagaaca
aaagcagaaggggagcacaatgaagatgacaagaggtacccaaagaagaaagtggtcctt
cttttggcatactctggaaagggatactatgggatgcagagaaatcctggaaactcccag
tttagaaccattgaagatgacctggtcactgctctagttaaatctggttgcattcctgga
aatcacggtgatgacatgaggaagatgtccttccaaagatgtgccagaacagataagggt
gtttctgctgctggtcaagtggtgtcactgaagctccgtttaattgaggacataatagaa
aaaatcaatgagaatttaccaccacagatcagggtgcttgggctcaagcgagtgacccag
ggatttaattccaaaaataactgtgatgcccgtacgtatgcctacatgctcccaactgta
gccttttctcctaaacactatgacactgagaacatagcagcatttcgtctagaagcagag
actcttcagaaggtgaaccaactttttgccctttacaaaggcacccataacttccacaac
ttcacttcccagaaggctccaagtgatcccagcgcccgccgctacatcacagagatgtcc
tgtggagagccttttgtctgcaacaaccatgagtttgctgtgatcactgtgcgaggccag
agctttatgatgcaccagattcgcaagatgatcggcctggtgatcgcagtgatcaaaggc
tatgccaaggaggaggtgatggagcgtagctggggtcaggaaaaggtggacgtcccaaaa
gcgccgggactcgggctggtactcgagagggttcactttgatcggtacaacaagcgcttt
ggaggggacggtctgcatgagcggctagagtgggatcgcgaggaggaggcgatcaaggcc
ttcaaagaggctcacatatatcctaccattgtcgagactgaatgtgaggaggggtccatg
atcagctggatggccactcttcccatccatgactttgaagcaacagttactggaacacaa
gacaataaggaccaaaaacaggagaatgcagatgaagggaacgactccgattag
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