Poeciliopsis prolifica (blackstripe livebearer): 129366442
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Entry
129366442 CDS
T09758
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129366442 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129366442 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129366442 (pdlim5b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129366442
NCBI-ProteinID:
XP_054896256
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All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSSSYSVSLASPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKAGMNIGDIILSINGISSE
GMNHLEAQNKIKACTGNLSLTLQRASAVSKEESHKEEPQEIIKPVPITHPAPSTTYTKPP
SQPTPLYNKTARPFGGGSSGVTASSSLTAPKVASIPSESSAFTPASPSQPPQPPFALKSS
LPASDSAIVNSGPKISASRSAFTSPSASSTSSNSSSSPRVTVPPAHPNVPQPSVYNTPIN
LYSNANACEVAIGQRRGLLESQGLSEHVNGKAVVEPEKSVSPLSDASKKRLIEDTEDWHP
RTGTSQSRSFRILAQMTGTENEQMPENGKKEAVDQTTPSVHTSSAAKTYSNSAAAPRNGS
VVPGSTFKTPAQNKNLQPGGLAGFSKVGAGPSFGKIVSPAQKEPDRPTPQPHPEDLNSLV
QRAEHIPAGTRTPMCCKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLAERGFVEEKNQV
YCVHCYEQFFAPTCASCNQKILGEVMNALKQTWHVSCFVCAACHQPIRGNTFHMEDGQPY
CERDYYTMFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCVVCSTSLEGQPFFSKKDKP
LCKKHAHSVNI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggccagccctgccccgtggggctttagactgcaa
ggaggaaaggacttctgcctgcccctcaccatctcacggctgactgacggaggcaaggca
gttaaagccgggatgaacattggagatatcatcctttccatcaatggcatttcctcagaa
ggcatgaatcacctggaggctcagaacaagattaaagcttgtaccggcaacctcagcctc
actctgcaaagagcctccgctgtctcgaaagaggaatcacacaaggaagagcctcaggaa
atcattaagcctgtgccgatcactcaccctgcgccgagcaccacatacaccaagccacca
agccagcccactcctttgtacaacaagacagctcgcccgtttgggggcggcagcagtggg
gttactgcttcttcctccctgactgctccaaaagttgcctctatcccttccgaatcatca
gctttcaccccagcctctccctctcagcctccacagcctcctttcgcattgaagtcaagc
ctccccgcttcagattcggccatagtaaactctggccccaaaatcagcgccagccgttct
gccttcacctccccctctgcctcatccacttcatctaactcctcatcttcacccagagtg
acggtaccccctgcccatcctaatgtcccgcagccctccgtctataacacacctatcaac
ctgtactccaacgccaatgcttgtgaagttgctattggacaaaggcgaggccttttggag
agccagggtctctcagagcatgtaaatgggaaagctgttgtggagcctgaaaagagcgtg
tcccctctgagtgacgccagcaaaaagcgtcttattgaagacacggaggactggcaccca
cggaccggtacctcccagtctcgctccttccgcatcctcgcacaaatgactggcactgag
aacgaacaaatgccagaaaatggaaaaaaagaagcagttgaccaaaccacccccagtgtt
cacacatcgtctgctgcaaaaacgtattccaattctgcagcagctcccaggaatggcagt
gtagtccctggatccacatttaagactcctgctcaaaataagaacctccagcctggaggt
ttagcaggcttttctaaagtgggagcaggcccctcatttgggaaaatagtcagtcctgct
cagaaagaaccggaccggcccactccacagccacatcctgaagatctgaactctttggtg
caacgtgctgagcatatacctgctggtacccgcaccccaatgtgctgcaagtgcaacaaa
gtcataagaggcccattcctcgtggccatgggcatgtcctggcaccctgaggaattcaac
tgcgctcactgccactcctccctggcagaacggggatttgttgaagagaagaaccaggtg
tactgtgtgcattgctacgagcagttctttgctcccacctgtgccagttgcaaccagaag
atcctcggagaagtcatgaatgccctgaagcagacctggcatgtgtcctgttttgtctgc
gctgcctgccaccagccaatcagaggcaacacatttcacatggaggacggacagccatac
tgtgaaagagactactacaccatgtttgggaccaactgccatggctgcgacttccccatt
gaggccggagacaagttcctggaggcgctgggttttacctggcatgacacctgttttgtg
tgtgtggtttgctccaccagcctggaaggccaacctttcttctccaagaaggacaagccc
ttatgcaagaaacatgctcactctgtcaacatctga
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