Poeciliopsis prolifica (blackstripe livebearer): 129366683
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Entry
129366683 CDS
T09758
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03320
PPAR signaling pathway
pprl04148
Efferocytosis
pprl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129366683 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129366683 (rxraa)
03320 PPAR signaling pathway
129366683 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129366683 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129366683 (rxraa)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129366683 (rxraa)
Nuclear receptors [BR:
pprl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129366683 (rxraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
129366683
NCBI-ProteinID:
XP_054896633
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRPSEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLTSPFSVISSPMGPHSMNSPGMGY
GPSISPQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESTSCANEDMPVEKILEAEEAVEPKTETYIETNLGMPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcctgtcattggggtttttgaagccccagtgctcattggctccc
cccatgcaacgaggtcgtccgtctgaggcctgttcatgtttcagtggtgtttgtcccctc
catcagcgtcgcctgtcctcagattcttcaggacaggtgacctcctcacctttaggctct
ccaacttcccatcgtggaatgcatccctctttgctgagccccacctccatgggcccctcc
ggctctctccattctcccatcagcaccctgagttcaccaatgaacggcctcacctcaccc
ttctcggtcattagctcccctatggggccgcactccatgaactcacctggcatgggctac
ggccccagcatcagcccacagttgaactctccgatgaactcggtcagcagcacggaggac
attaagcccccgctgggcctcaatggcgtgatgaaggtgcccgctcagccctcaggcacg
gctctgtcgctcaccaagcacatctgcgccatctgcggcgaccgctcctcaggaaaacac
tacggtgtctacagttgtgaaggctgcaaaggcttcttcaaacgaaccgttcgcaaggac
ttgacctacacctgccgtgacaacaaggactgtgttatcgacaagcgccagaggaaccgc
tgtcaatactgccgctaccagaagtgcttggccatgggcatgaagagagaagttttgtta
catgcagccgtccaggaggagcgccagcgagccaaggacaagaatgagaacgaggtggag
tccaccagctgcgcgaacgaggacatgcccgtggagaagatcctggaggccgaggaggcg
gtggagcccaaaaccgagacctacatcgagaccaacctggggatgccgtccaactcgccc
aacgacccagtgacaaatatctgtcaggcagcagacaaacagctttttactctggtggag
tgggccaagaggattccccacttctcggagctgccgctggacgaccaggtcatcctgcta
cgagcaggttggaatgaactcctcattgcatcattttcgcaccgttccatcgcagtaaag
gacgggattctgctggcgacgggactgcacgtgcatcgcaacagcgcccatagtgccgga
gtgggagccatctttgacagggtgctcacagagctggtgtcaaaaatgagagacatgcag
atggataagactgagctgggctgcctccgagccatcgtccttttcaacccagactctaaa
ggtttgtccaacccaggtgaggtggaagcgctgagagagaaagtctacgcatctttagag
gcttactgcaaacagaaatacccagagcagccaggcaggttcgctaagctgttgctgcgg
ttaccagcgctgcgctccatcggactcaagtgtttggagcaccttttcttcttcaagctg
attggcgacacacccatcgacaccttcctgatggagatgctagaagctcctcatcaaatg
acataa
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