Poeciliopsis prolifica (blackstripe livebearer): 129366854
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Entry
129366854 CDS
T09758
Symbol
ccdc88aa
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129366854 (ccdc88aa)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129366854 (ccdc88aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
Motif
Other DBs
NCBI-GeneID:
129366854
NCBI-ProteinID:
XP_054896896
LinkDB
All DBs
Position
Unknown
AA seq
1738 aa
AA seq
DB search
MESGDFLSSVDQFMLSPLVTWVKTFIPADEGVHLDFSDLLDGGILNKIMAQINPSAATQC
PNKVCRDPGQRIQNLNFLVQQIRSYYLDNLRQLIMIPLPDVLLLGRTPYCEQSLEEMKNL
LLLLMGCAVQCQKKDEYIERIQTLDFDTKAAIAGHIQELTHTQENMLDLQWLGSSGVHPE
EMETAMRNMATHLQHILDQRDTHLETIVELMLEKEGSVSLLSSPSSPQSASHSPSMQQQA
GTQQHLAVELADSKAKIRRLRQELEEKSEQMLDCRHELENVETELKRIQQENSQLQVDAR
AARTYRDELDALRERAIKADKLESEVGRYKEQLHKMEFYKAKVEELKEDNRVLQETKEVL
EDQLEGWRSRTDKIHQLEKHNLLLKARVHDMEQEKEADAKRMKELQEENLALSLAQRRSM
EESQHLGWELEQLSKTAENSHGPQTLSEEVSEKTQSQILKLEKENQRLLRTIEELRAAAH
SSCRKAKPSPTISSAEQSETNSFSEDSHCQQQVITEELEGVQSQILLTDYPDCRAQENGG
LQDQDKEMVSGLETLENNHNQFHCCVGSCGQSPGSQSRRPHHDSTHTGVPTRSSYASRHT
QRLEVKCRGLDTLNQQLQTSLYNTERKVQRLEAEVQEMEAENQALQASLEELRISARRLE
QLETEKQNLEHETSTLEKDKRQLEKENRRLRQQAEIQEANLDSRNVCMASLEREMRLLVK
EAEGLRETSERVKSLERDNRELIKQAAIDQKTLATLREELVSEKLKTQQRDNELETLSHE
LEMKVLNQENAQLEAADSRVKMLESELESSLKKSLRIKDDKMASLEARLQESSFLNQQIL
QELKTVKLSHEALQQRQEEERTALGSSPPAQTNKAMTEWLWESQEATRELLRLKDRLIEV
ERNNATLEAKRQAAQVQLKQLESQSESQQAQILALQRQAASLQESNTALQTHNANLQVEK
STLNSQSASLMAQNAHLQQQQSGIESERDSAVQEREELRGAHEQLLRDHERLTVLHERQA
MECEALMGKHACLKNAHRTLELEHRTLQDRYNNLMQQRTKLEEREKTLKEEQMRISLEKE
QYQATAAECSRLRDETDRLTRTYRLLLSDFEALTADHKLLKSQLNEANLKYTWLEADFSK
LKKEDQELDINFTKLTNQCELLSQLKGNLEEENRHLIGQIETLMLQNRSLLEQNMESKDL
FHVEERQYIDKLNDLRRQKEKLEEKIMDQYKFYDPSPPRRRGNWITLKLKKLMKSSSREN
VPESTQASEAEAHCYGGSFISSDGSGGDFTSQQRGSTPVKKFSRLRSRLKDKDKVKSIFR
RSLSLSSLSQPSPSFETKQEIDVDEGQEDLLTPSLSTSELSILQHHQHHPTTLPSGHFNN
NTPVTGPNISELWLTDKDSNGSIVPSGCEESDGLQNHGTSAVQCRAQSESSVELSLSLEN
EPWSNGSSPVQQPPSRNSPCSYQPPSDVSTPQPHSKLQQSGEKAATMPTPNSVNADMFQR
QKDPVLSQDFWLTRGTRTIRRGSRKKVSRRSSDSGSAGKTNSELDGVSDKAQASACSPIT
VLYVQGKSSSMSGCLNCFSTPLVKEAQLGEFRSPKSLPHASSVISSAEGSPRRSSVSSDC
RGTVQTEQQEQAQNSDVRDSEPRPVPPVKPPRDPAVIVPTKHPKSVLQEPPLGSSFTFSS
VFSDTIFSDSEITTTTLDSIDMSTNFPGLNPLAQQNSPPEREENAEETPQTLLSSENE
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagatttcctgtcgtccgtggatcagttcatgctgagccctcttgtcact
tgggtgaagacattcattccagctgatgagggcgtccacttggacttttccgaccttctg
gatggagggattctgaacaagataatggctcaaataaatccttctgctgcaactcagtgt
ccaaacaaagtctgcagagatccaggtcagaggatccagaacctgaactttcttgtccag
caaatcagaagttattatctggataatctgagacagttaatcatgattcctttgccagac
gtgctgttgctgggcaggactccgtattgtgaacaaagtctggaagaaatgaagaacctt
ctgctcttattgatgggctgtgcagttcagtgtcagaaaaaggatgagtacattgagagg
attcagacgcttgactttgatacaaaagctgccatagctggacacattcaggagctgacc
cacactcaggagaacatgctggatctccagtggctggggtccagtggtgttcacccagag
gagatggagaccgctatgaggaacatggcaacacacctccaacacatcctggaccagagg
gacactcatctggagacaatagtggagctgatgctggagaaggaaggatctgtcagcttg
ctcagcagcccatccagtccacagtctgccagccattctcccagcatgcagcagcaggcg
gggacccagcaacatctggctgtggagttggctgattctaaggcaaagatcagacgactt
aggcaggaactagaggaaaagagcgaacagatgctcgactgcagacatgagctggaaaat
gtggagaccgaactcaaacggattcaacaggagaactcccagctgcaggtggatgcgcgt
gctgcccgtacctaccgggatgagctcgacgccctgagagagcgcgccatcaaggcggac
aagctggagagcgaagtcgggcgctacaaggagcagctgcacaagatggagttctacaaa
gccaaagtggaggagctaaaggaggacaacagggtcctccaagagaccaaggaggtgttg
gaggaccagctggagggctggaggtcccgaacagataaaatccaccagctggagaaacac
aacctgctgctgaaggcccgcgtccatgacatggagcaggagaaagaagccgatgcgaag
cggatgaaggagcttcaggaggagaacctggctttgtctttagcgcagaggaggagcatg
gaggagtctcaacacctgggctgggagctggagcagctctccaagaccgcagaaaactcc
cacgggccccagaccctgagcgaagaggtcagcgagaaaacccagagtcaaattttaaag
ctggagaaagaaaaccaaagactcctgaggaccatcgaagagctaagagctgcagctcat
agcagctgcagaaaagccaaacccagccccactatctcatcggcagagcaatcagagaca
aactccttctcagaagattcacactgccagcagcaagtcatcacagaagagctggaagga
gtccaaagtcagattctactcacagattatccagactgccgcgcgcaggagaacggaggc
ctacaggatcaagacaaagaaatggtgtcgggtctggaaaccttggaaaataaccacaat
cagttccattgctgtgtcgggtcatgtggtcagtccccaggctcacagagcagaaggcca
caccatgatagcactcacacaggtgtgccaacacgttcgtcttatgcaagcaggcacaca
cagcggctggaggttaaatgcaggggtctggacacgcttaaccagcagctacagacttct
ctttacaacaccgaacgtaaagttcagcgtttggaggctgaggttcaggagatggaggca
gagaaccaggcgctgcaggcatctctggaagagcttcggatctcagcgcggcgtctggag
cagcttgaaactgagaaacagaacctggagcatgaaacctccacgctggagaaagacaaa
aggcaactagagaaagaaaaccgaagactccgacagcaggccgaaattcaggaagccaac
ttagacagccgcaatgtctgcatggcaagcttggaaagagaaatgcgtctgctggtgaag
gaggcagaggggttaagagaaacatccgagagggtcaaaagcttggagagagacaacaga
gagctgatcaaacaagctgctattgaccagaagaccctggcaaccctcagagaggagttg
gtgagtgagaagctgaaaacccagcagagagacaacgagctggagacgctgtcccacgag
ctggagatgaaagtcctgaaccaggaaaatgcacagctagaagcagcagacagcagggtc
aagatgctagaatccgagctggagtcgtctctgaagaagtccctgcggatcaaagatgac
aagatggcttctctggaggctcggctgcaggaatcctcctttctaaaccagcagatcctg
caggagctgaagactgtgaagctgagccacgaagccctgcagcagcggcaggaggaagag
cggacggcgttgggttccagccctccagcgcagaccaacaaggccatgacggagtggctg
tgggagagccaggaggctaccagggagctgctgaggctcaaagaccgcctgattgaagtg
gagagaaacaacgccactctggaggccaaacgccaggcagcgcaggtccaactcaaacag
ctggagagtcagtcagagagccagcaggcgcagatcctcgccctgcagaggcaggccgcc
tcgctgcaggagagcaacacggccctgcagacacacaacgctaacctccaggtggagaag
tcgacactaaattcccagagtgcctccctcatggcccagaacgctcatctgcagcaacaa
cagtctggaatagaaagtgagcgtgacagcgccgtacaggaacgggaagagctgcgtggc
gcccatgagcagctcctgcgagatcacgagcgactgacggttctgcacgagcgacaagcc
atggagtgtgaggctctgatggggaaacatgcctgtctgaagaacgcccaccgcacgctg
gagctggagcatcgaaccttacaggacagatataacaacctgatgcagcagagaactaag
ctggaagagcgggagaaaaccttaaaggaggagcagatgaggatctctctggagaaagaa
cagtatcaggcaacagcagctgaatgttccaggctccgtgacgagacggaccggctcacc
cgcacataccggctgcttctcagtgacttcgaggcgctgacagcggaccacaagttgctc
aagagccagctgaacgaggccaacctgaagtacacctggctggaggccgacttctccaaa
ctgaagaaggaagaccaggagctggacatcaacttcacaaaactcaccaaccagtgtgag
ttgctgagtcagctgaaagggaaccttgaagaagaaaatcggcatctgatcggtcaaatc
gagaccctgatgctgcagaaccgaagcttgctggagcagaatatggaaagcaaggatctg
tttcatgttgaagagcgacagtatattgataagctcaatgatttgagaagacagaaggag
aagctggaggaaaagataatggaccagtataagttttacgacccctcccctcctcgcagg
cgtggcaactggataactctgaagctaaagaagctgatgaagtccagcagccgtgaaaac
gtccctgaaagcacgcaagcatctgaggctgaagcccactgctacggtggctccttcatc
agctccgatggatctggaggtgacttcacctcacagcagcgtggcagcacccccgtgaaa
aagttttcccgtttgaggagcaggctgaaggacaaagacaaagtcaagtccatcttccgt
cgttctttgtccttgagcagcttatcccagccatcgccctcatttgagacaaagcaggaa
attgatgtggatgaaggccaagaggatctgctgaccccatctctcagtacctccgaatta
tccatcctccaacatcaccagcatcatcccaccactcttccatctggccatttcaacaac
aacacccctgtcactggcccaaacatttctgagctctggcttacagacaaagattcaaat
ggcagcattgtgccatctggatgtgaggagagcgacgggctgcagaatcacgggaccagt
gcggtccagtgtcgagcccagagtgagagcagcgtcgagttgagcctgagcctggagaat
gagccttggtcaaacggcagcagtcctgtccagcagcccccgtcacgtaactctccatgt
tcctaccagccgcccagtgacgtgtccaccccgcaaccccactcaaagcttcagcaaagc
ggggagaaagccgccacgatgccgactcctaacagtgtgaacgcagatatgtttcagaga
caaaaagatccagtgctgtcccaggacttctggctcacgagaggcacaagaaccatccga
agggggtcgaggaaaaaagtgtctcgtcgctcctcggactctggcagcgcaggcaaaact
aactcggagctcgacggggtaagcgacaaagctcaagcctctgcttgttcaccgatcaca
gtgctctatgttcagggtaaatcatcctcaatgtctggctgtctgaactgcttctctacc
cctcttgtgaaagaggcacagctgggggagttcaggtctcctaaaagtctccctcacgcc
agcagcgtgatttcttcagcagagggctcacctcgacgctccagtgtcagcagcgactgc
agggggactgtccaaaccgagcaacaggagcaagcacaaaactctgacgtaagagacagt
gagcccaggcccgttcctccagtcaaacctccaagagatccagcagtcattgttcccaca
aaacatcccaaatccgttttgcaggagccgcctcttggctcgtcattcacctttagctcg
gttttctcagacacaatcttcagcgattctgagatcaccacaacaaccttggactctatt
gacatgagcacaaatttccctggtcttaatccattggcacagcaaaactctccccccgag
agagaagaaaacgctgaggaaacaccacagacactgcttagctctgaaaacgagtaa
DBGET
integrated database retrieval system
