Poeciliopsis prolifica (blackstripe livebearer): 129366860
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Entry
129366860 CDS
T09758
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129366860 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129366860 (taf5)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129366860 (taf5)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129366860 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
129366860 (taf5)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129366860 (taf5)
STAGA complex
129366860 (taf5)
TFTC complex
129366860 (taf5)
SAGA complex
129366860 (taf5)
SLIK complex
129366860 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
VPS8_N
CDK5RAP3
LisH
Beta-prop_WDR11_2nd
LisH_PAC1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
129366860
NCBI-ProteinID:
XP_054896907
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MAAVQGSIVDAKDEADIKTEPATDGFGNNHANDAGVLSASPGSSAAAGNSKPATGAPEDQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEVLDPKGADSAGSGLGSGADIDGGDASALL
SRVTVSAPGGAKAPTKAAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHEGEAKAFFEKFSGDQECYYEEDLRILSSLTKKEHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPDNLPSICFYTFLNAYQGL
TAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTATDLNLIDKESDDVLERIMDDKTA
SESKCLYGHSGPVYGISFSPDRNYLLSCSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQF
SPYGYYFISGGHDRVARLWATDHHQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTIRL
WDVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGHTEC
IYSLRFSRDGEILGSGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELLLGTY
MTKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtagtatagtcgacgcgaaagacgaagccgacattaaaacagaa
ccggcgaccgatggcttcggaaataatcacgccaacgacgcgggagttctctccgcgtcc
cccggctccagcgctgcggctggaaacagcaagccggcgacgggagcccccgaggaccag
cagaccctgctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgcagaa
attctgcgtcgcgaggcgggattgccggaggaggttctggatccaaagggggctgactcc
gccggttctgggctgggaagtggcgcggacatagacggcggggatgcgagcgctttgctc
agccgggtgaccgtctccgctcccggcggagcaaaggcgccaaccaaagcagctggagag
gatcagccggacgtcaacgtggttctgtcagcctacagccagcagggagacccagctctc
tatgaagtttactacagcggcctgaagaagttcatcgagtcggttctggactgccacaga
gcagaactgtctcaggtcttctaccctctgttcgtccacatgtacctggaactggtctac
aacaatcatgaaggcgaggctaaggccttctttgaaaagttcagcggggaccaggagtgc
tactacgaagaggacctacgcattttgtcgagccttacgaagaaggagcacatgagaggg
aacgagactctgctggatttccgcaccagcaagttcgttttgcgcatctcccgcgactcc
taccagctgctgaagaggcacctgcaggagcgccagaacaatcagatctggaatataatc
caagagcacctgtacatcgacatcttcgatggcatgccgcgcagcaagagccagatcgac
gccatgtccggcagcttggccggagaggccaaacgagaagcaaataaggccaaggtttac
tatggcctgctgaaggagccagaaatcgagcttcccctcgatgatgaggatgaggaagca
gagaacgaggaaggtaaacccaagaagaaaaagcccaaaaaggacagcaccgggtccaaa
agcaagaagcaagatccaaatgctccttcacagaccaggatacctctgcccgaactaaaa
gactcagacaagctggacaagatcatgtacatgaaggagtccaccaagagaattcgtttg
ggacccgacaacctgccctctatctgcttctacacctttctcaacgcataccagggtcta
acagcggttgatgttacggacgactccagtctgatcgcagggggcttcgctgactccacg
gtgcgggtgtggagcgtcacgccgaagaagctccgcaaggtaaagaccgccacagatttg
aatctgattgacaaagagtcagatgacgttcttgagaggattatggacgataagacggcc
agtgagtcaaagtgcctctacggacacagcggaccggtgtatggcatcagcttcagccca
gacagaaactacctgttgtcatgctctgaagatgggacggtcaggttgtggagcctcctc
actttcacctgtctggtgggatacaaaggccacaactacccagtgtgggacacgcagttc
tccccttacgggtattattttatctccggggggcacgaccgggtcgcccgcctgtgggcg
accgatcaccaccagccgctgcggatattcgccggtcacctggccgacgtcacttgcact
cgtttccatcccaacgcaaattacgtggccacaggctcgtccgaccgcaccatccgtctg
tgggacgtcctcaccggaaactgcgtccgtattttcaccggtcacaagggtcccattcat
gcgctggcgttctctcccaatgggaagtttttggcctcgggagccactgacggccgagtc
ctcctgtgggacatcggtcatggactgatggtcggagagctcaagggtcacacagagtgc
atctactccctcagattcagcagggacggagagatcctcgggtccggctctatggacaac
acggttcgcctgtgggacgcgacgaaagcgtttgacgatttagaaacggacgacttcact
gcggctacgggacacatccacctacaggataactcccaggagcttctgctgggcacctac
atgaccaaatcaacacctgtagttcacctgcacttcacacggaggaacctgcttctggct
gcaggagcttataatccataa
DBGET
integrated database retrieval system
