Poeciliopsis prolifica (blackstripe livebearer): 129366955
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Entry
129366955 CDS
T09758
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04110
Cell cycle
pprl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129366955 (smc3)
04114 Oocyte meiosis
129366955 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129366955 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprl00535
]
129366955 (smc3)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129366955 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
129366955 (smc3)
Proteoglycans [BR:
pprl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129366955 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
129366955
NCBI-ProteinID:
XP_054897079
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKVSAMKEEREQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEMNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELAELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKETLARSDDLDGLIDKTEAEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGEGSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaaacaggtcattatccaggggttcagaagttatagggatcaaactgttgtg
gatccatttagtcccaagcacaatgtgatcgtcggcagaaacggatctggaaaaagtaac
tttttctatgctatccagtttgtgctcagcgatgaattcagccacctgcgacccgaacag
cgcctggccctgcttcatgaaggaactggtccacgtgtcatttcagcttttgtggagatt
atatttgataactccgacaaccggctgccgatcgacaaagaggaggtttcccttcgccgt
gtcatcggcgcaaagaaggaccagtacttcttggacaagaagatggtgactaagaatgac
gtcatgaaccttctggagagcgccggcttctctcgcagtaacccgtactacattgtcaag
cagggaaaaatcaaccaaatggccacagcgcccgattctcagcgactgaagcttctgaga
gaggtggcaggaacgcgagtgtacgacgaacgaaaggaggagagtatttctctcatgaag
gagacggagggaaagcgagagaagatcaatgagctgctgaagtacatcgaggagcgtctg
cataccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agggctctggagtacaccatttacaaccaggagctgaatgaaactcgagccaaactagat
gagttgtcaagcaagagagagacctgtggagacaaatccagacaactgcgtgatgctcag
caagacgcccgggacaaagtagaggagacggagcgcgttgtgcgcgagctcaagtccaag
gtctctgccatgaaggaggagagagagcaactgtcggcggagcgccaggagcagatcaag
cagaggaccaagctggagctgaaggccaaggacctgcaggatgagctggcaggcaacagc
gaacagaggaaacggctgctgaaggagcgtcagaagctgctggagaagatcgaggagaag
cagaaggagcttcaggagacggaacccaaattcaacatggtgaaggaaaaggaggagcgt
ggcatctctagactggctcaagctacccaagagaggactgacctgtatgccaagcagggc
cgcggcagtcagttcacctccaaggaagagagagacaagtggatcaagaaggagttgaag
tcactggaccaggccataaatgacaaaaagaggcagattgcagccatccacaaagacctg
gaggacacagagatgaacaaggagaagaacctggagcagtacaacaaacttgatcaagat
ttaaatgaggtgaagacccgggttgaagagctggacaaaaagtattatgaagtgaaaaac
aagaaagatgaactccagagtgaaagaaactacctgtggcgagaggagaacgcagagcaa
caggccctggcagccaagcgagaggacctggagaagaagcagcagctcctccgcgcggct
acaggcaaggccattctgaacggtatcgacagcataaacaaagttttggagcatttcagg
aggaaggggattaaccagcatgtcatcaatggttaccatggcattgtcatgaataatttt
gagtgcgagccagctttttacacctgcgtggaagtgacagcagggacacgactgttttac
cacattgtggaaacggacgaagtgagcacaaaaatcctcatggagtttaacaaaatgaac
ttacctggagaagtgaccttccttccactcagcaagctggacgtcagagacaccgcctac
ccagaaaccaatgacgccatccctatgatcagcaagctgcgctacagtccaaactttgac
aaggcctttaagcacgtgtttgggaagacgctgatttgtcgcagcatggaggtttccacg
cagctggcccgagcgttcaccatggactgtataactctggagggagaccaggtgagccac
agaggagcgctgaccggaggttactatgacaccaggaagtctcgcctggagctgcagaag
gacatgagaaaggccgaggaggagctggccgagctggaggccaagctcaacgagaacctg
cggcggaatatcgaacgaatcaacaacgagatcgaccagctgatgaaccagatgcagcag
atcgagacgcagcagaggaagttcaaggcctccagggacagcatcctgtcagagatgaag
atgctgaaggagaagaggcagcagtctgagaagaccttcatgcccaagcaacgcagcctc
cagagcctggaggccagcctccacgccatggagtcgacccgggagtcgctgaaggccgag
ctcggcaccgacctcctctcccagctcagcctggaggaccagaggcgcgtcgacgacctc
aacgacgagatccgtcagctacagcaggacaacaggcagctgttaaacgagaggatcaag
ctggagggaatcatgacccgagtggaaacgtatctcaacgagaacctgaggaaacgtctt
gatcaagtcgaacaggagctgaatgagctgcgtgagacagagggcggcacggttctcaca
gcgaccacgtctgagctcgacggcatcaacaaacgagttaaagagactttggctcgatca
gacgacctggacggtctcatcgacaagacggaagcggagatcaaggaccatataaagagc
atggagcggtggaagaacatcgagaaggagcagaacgacgccatcaaccacgacaccaag
gagctggagaaaatgaccaacaggcagggcatgctgctcaagaagaaggaggagtgcatg
aagaagattagagaactgggctccctgcctcaggaagcctttgagaagtaccagaccctc
acactcaaacagctgttcaggaagctggagcagtgcaacacggagctgaagaagtacagc
cacgtcaacaagaaggccctggatcagttcgtcaacttctccgagcagaaggagaagcta
atcaagcgtcaggatgagctggatcgtggctacaaatccatcatggagctcatgaacgtg
ttggagctgcgcaaatacgaggccatccagctcacctttaagcaggtgtcgaaaaacttc
agcgaggttttccagaaactcgtcccgggaggcaaagccacgctggtgatgaagaagggc
gacgccgaaggcagccagtcgcaggacgagggcgaggggggagaaggcagcgagagggga
tccggatcccagagcagcgttccttcggtggaccagttcacaggagtcggcatcagagtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctgtccggaggtcagaag
tctctggtggctctggctctgatttttgccatccagaagtgcgacccggctcctttctac
ttgttcgatgagatcgaccaggccctggacgcccagcacaggaaggctgtgtcagacatg
attgtggagctggccggccacgctcagttcatcaccaccaccttcaggccggagctgctg
gagtcggcagacaagttctacggagtcaaattcaggaacaaggtgagtcacatcgatgtg
atcacagcggagcaggccaaggactttgtggaggacgacaccacccatggttaa
DBGET
integrated database retrieval system
