Poeciliopsis prolifica (blackstripe livebearer): 129366983
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Entry
129366983 CDS
T09758
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129366983 (pcdh10a)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129366983 (pcdh10a)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129366983
NCBI-ProteinID:
XP_054897125
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MIWLILLLSILNGALCQLHYSVPEEQEPGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDVNDNPPSF
PEPDIFVEISESAIPGTRFPMENAFDPDVGTNALSTYAITNNNYFSLDVQTQSDGTKFAE
LVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPTFDESVYTVNLRE
NSPVGTLVIQLNATDVDEGLNGEIIYSFSSHNTPRIKDLFNIDERTGRIEVAGEVDYEES
NTHQINVQAKDLGANAVPAHCKVLVKLVDVNDNTPEISFSTVTESVSEQHAPGTVIALFS
VSDRDSGENGQMSCEIMGDVPFKLKSSFKNYYTIVTDGSLDRENTDSYTITVVATDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVTALDPDIGQNSLITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGVVELFSNATVNV
IIVDQNDNAPSVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQAFYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
ECCLCCGSCCSRQSRGRKQKKLSKSDIMLVQSTNVTTGVGPVGQVPVEESGVGSVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSNDADHTNPCGAIVTGYSDQQPDII
SNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
CSVNLSDQLTMTSSTASSNDRSFSTFGKDGQRSQSHHSLQNHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYETSLGPYDFGLVQYRN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatacttctgctctccattctgaatggagctctatgtcagctgcactac
tccgtgccagaagagcaagagcctggcaccgtagttgggaatatcgcagaagatctaggt
ttggacattaccaaactttccgctcgccggttccagacggtgccaagttcgcggacacct
tatctggaggtgaacttggagaacggcgcactggttgtgaaggagaaaatagatagggaa
gaaatctgtaagcagaccatcccgtgcctgctgcacctggaggtgttcttggagaatccg
ctggagctgttccgcgtggagatcgaggtgatggatgtcaacgacaatccgcccagcttt
ccggagccggacattttcgtggaaatatctgagagtgccatacccgggactcgtttcccc
atggagaacgcattcgaccccgacgttggcaccaacgcgctcagcacgtatgctataacc
aacaataactatttttccctcgacgtgcagacacagagcgacgggaccaaattcgcggag
ttggtgctggagaagccgctggacagagagcagcaagcggtccatcgctacgtgctgacg
gctgtggacgggggcgtcccgcagcggaccggaacggctctgttggtagttaaagttctg
gactctaacgacaacgctcccacgttcgatgagtccgtgtacacggttaacctgcgggaa
aactcacccgtggggactctagtcatccagctaaacgccacggatgtagacgagggacta
aacggagaaatcatttattccttcagcagccacaacaccccacggataaaagacttgttc
aacatcgacgaaagaacgggcaggatagaagtggccggcgaggtggactacgaagagagc
aacacgcaccaaatcaacgtccaggcgaaagatctgggggctaacgccgtccctgcgcac
tgcaaagtgctggtaaaacttgtggacgtgaatgacaacacaccggagatcagtttcagc
accgtaactgagtctgtgagcgagcagcacgccccgggcaccgttattgctctcttcagc
gtttcggaccgagactctggtgagaatggtcagatgagctgtgagatcatgggcgacgtc
ccattcaagttgaaatcgtcgtttaaaaattactacaccatcgtgacggacggctcactt
gacagggaaaacacggactcatacaccatcacagtcgtggccacagacaaaggtcagccc
tcgctggccaccagcaaatcaattaaggtgcacgtctccgacgagaacgacaacgcgccc
cgctttacgcaggctgtttatgatgtttatgtgactgagaacaatgtgcctggcgctttc
attcacgcagtgaccgccttggaccctgatataggacaaaattctttaattacctactcc
atattggagtgtgacatccagggaatgtctgttgacacgtatgtctccataaaccaagac
accggctacctttacgcgctgcgctctttcgattatgagcagctgaaagagttcagcttc
atggtccaggctaaggactcaggtgttgtcgagttgttctccaatgccaccgttaacgtg
atcatagtcgaccaaaatgacaacgctcccagcgttatagcccctataggtaaaaacggc
actgctaaagaacacttgccgcgttctgcggagcctggatatctggtgacgcgcatcgtg
gccatggacgcagatgatggcgaaaacgcacggctgtcctacagcatcctgcggggcaat
gagatgggaatgtttcgcatggactggaggaccggagagctgagaacggcgcgcaggatc
tcccccaagcgggacccacaggctttttacgacctgctgatagaggtgagggaccacggg
cagcctcctctctcctcttccgccagtgtgagcgtaatactagtggacagcgtggtggag
ggccgcagtggggaccgtggctcggcctccaaggctaaagagacttctcttgatctcacc
ctgattctcatcatcgccctgggctccgtgtcctttatattcctcctggccatgatagtg
ctggctgtgcgctgtcaaaaggacaagaagctcaatctgtacacgtgcctgctggccggc
gagtgctgcctgtgctgtggctcctgctgcagcaggcagagccgcggaaggaagcagaag
aagctgagtaaatccgacatcatgctggttcagagcaccaacgtgaccacgggagttggg
cccgtcgggcaagtgccagtggaggaatctggggtggggagcgtgggaggcgggtttggc
tcccaccatcaccaaaaccagaactcctattgctaccaggtatgcctgacaccggagtct
gccaagactgatctgatgttccttaagccgtgcagcccctcccgcagcaacgacgccgat
cacaccaacccatgcggggcaatagtgaccggctacagtgatcagcaaccggacattata
tctaatggcagcattctatccagtgagacaaaacatcaacgagcagaactcagctatctg
gtggacagacccaggcgtgtcaacagttctgcatttcaagaggcagacattgtcagttct
aaagacagtggtcacggcgacagtgaacagggcgacagcgaccacgacgcaacaaaccgg
ggtcactcagccggtgctgacctgttctccaactgcacagaggagtgcaaagccctgggt
cattctgaccgctgctggatgccgtcctttgtgccatcagatgggcgccaagggccggac
taccgcagcaatctgcacgtccccggcatggacgccacgctacccgacactgaggtaccc
tgctccgtcaacttatccgaccaactcacaatgacctcctccaccgcctcgtccaacgat
aggtcattctccacctttggcaaggacggccaaagatcacagtcacaccacagccttcaa
aatcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaaccaacctttctctgtgagtatcagtatgaaacctca
ctgggaccctacgattttggtttggtccagtatagaaactaa
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integrated database retrieval system
