Poeciliopsis prolifica (blackstripe livebearer): 129367152
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Entry
129367152 CDS
T09758
Symbol
si:ch211-79m20.1
Name
(RefSeq) uncharacterized protein si:ch211-79m20.1
KO
K17386
platelet-derived growth factor subunit B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04020
Calcium signaling pathway
pprl04510
Focal adhesion
pprl04518
Integrin signaling
pprl04540
Gap junction
pprl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129367152 (si:ch211-79m20.1)
04020 Calcium signaling pathway
129367152 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
129367152 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129367152 (si:ch211-79m20.1)
04540 Gap junction
129367152 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129367152 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprl04052
]
129367152 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129367152 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
pprl04052
]
Cytokines
Growth factors (RTK binding)
129367152 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
129367152 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
129367152
NCBI-ProteinID:
XP_054897424
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MPSRTPAAPQPGRKHEDLGAATAAAGRLLGLAGNAESDPLPQSLIDLVSDSPISSVEDLK
LLLQQQGSNIIEDKEDEHDSPNPIHGRYIRSPANVQAQKAVCKLRTEVLEIPRSLVDPAN
ANFMVLPQCVEVQRCSGCCNSRLMECAATSNITRNLEVRKIEFRNNRSFIKPVVIPVLDH
VTCQMKRKKSSSKSGSSSSSTSSSTSSTTDSLPDPVPPVPQRYPASSPSMFPAHSPYPHP
PKEDLHRHDDLKHNQHHHLPHRQDPLESQWEQGSYTQLARWPQPRVQHAPTYAQTRLTTA
GFLGSVGTWPPGARAEPSILESPQQDSATSQTYGEVQGDGPKDGTEREESGSTVSGGSGR
AEAADQEKENDSKLSGGADRLTKEERRKRLLEMVQSEPDKDPNLHPDQRPKTASSPVETA
STAARQVPFRPASPRRRKRKHRKRISKSAMRAMIM
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccggacccctgcggctcctcagcctgggcggaaacatgaagacctgggtgct
gctaccgctgctgctgggcggctgttgggtctggcagggaacgctgagagcgatccactc
cctcagtcactgattgacctggtgtcggactctcccatctcctcagtggaggacctgaag
ctgctgctgcagcagcaggggtccaacataatagaagataaagaggacgagcacgacagt
ccaaacccaatccacggtcgatacattagaagtcctgccaatgtgcaagctcagaaggcg
gtatgtaaactcagaacagaggtgctggaaataccaagatccctggtggatcctgctaac
gccaacttcatggtgttgcctcagtgtgtggaggtgcagcgatgttcaggctgctgcaac
tccagattgatggagtgtgctgccacttctaacatcacccgaaacctggaggtaagaaag
attgagttcaggaacaacagaagttttattaaacccgtcgtcatcccagtactagatcac
gtgacctgtcagatgaagaggaagaaatctagctccaaatcgggttcttcttcttcttct
acttcttcttctacttcttcgacaacggactcgctaccagaccctgttccacctgtccca
caaagatatcctgcatcctccccatcaatgttcccagcccacagcccctacccacatcca
ccaaaagaggacctccaccgccacgacgatctcaagcacaaccagcaccaccaccttccg
cacaggcaagatccgttggaaagtcagtgggagcagggcagctacactcagctggcgcgc
tggccgcagccccgagtgcaacatgcccccacatacgcacagacccgactcacgacggcc
ggatttctcggctcagtcgggacctggccccctggggcgagggcagagcccagcattctg
gaaagtccgcagcaagactcggcgacgagccaaacgtatggagaggtccaaggagacggt
ccaaaagacgggaccgaaagggaagaaagtgggtccacagttagcggtggctcaggtcgg
gcagaggcagccgatcaagagaaggaaaatgactctaaattaagtgggggggcagaccgt
ttaacaaaggaggagagacgaaagaggctactggagatggtacagagtgagccggacaaa
gaccctaatctgcatcctgaccaaagaccaaaaacagcatcgtcccctgtggaaaccgcg
tcgacggcggctcgtcaggtaccgttccgacccgcttctcctcgccgtagaaaaagaaaa
caccgcaaacgtatcagcaaatctgctatgagggctatgatcatgtag
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