Poeciliopsis prolifica (blackstripe livebearer): 129367420
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Entry
129367420 CDS
T09758
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129367420 (irx4a)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129367420 (irx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
129367420
NCBI-ProteinID:
XP_054897785
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYAGGQGYGNYVTYGTDASAFYSLGTFDTKDAAASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEEGSQEGQIKSENTDDET
RSRADKELQLSDLDDFDTLESESSECEMKHRYHMNTHMSTTSDCSAEHLVKNASLKISVP
VPLGGEQDLGKSCIKTSPEDFQPDSMQQQQPKSCYTQQQQSHQLLDGKPRIWSLAQTATS
LNQTEYPSCMLRCQAPPSSLAQSPAATSPVTVLDNRQDSPVTTLRNWVDGVFHDPLFRHS
TLSQALTNTTVSWTTNTKGSVLEAERSAAALQQHQDPPKDSAMSFPKTINKLFCS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccatactcatctgctccacaattcctgatgacaacc
aactctcttaccacttgctgcgagtccacgggtagatccatagcggactccggggttgcg
gcgtctggacagacacctgtctactgtcccgtgtatgagagccggctgctggccacggcg
aggcacgaactgagctccgcggccgcgctcggcgtgtacggcagcccctacgccggcggt
cagggctatggaaattatgttacatacgggacagacgcgtcggctttctactcgctgggt
acttttgatactaaagatgctgcagcttctgcgcatgcgggaatcacacaagcaactgct
tactatccttatgatcctaccttgggacagtaccagtatgacagatatggttctatggat
ggggggacaaggcgaaagaatgctacccgtgagaccaccagcaccctgaaggcctggctg
caggaacacaggaagaacccgtacccaaccaaaggggagaagatcatgctggccatcatc
accaagatgaccctgacacaggtctccacctggttcgcgaatgcccgcaggaggctgaag
aaggagaacaagatgacgtggccgcccagaaacaagggctcagaggagaagagatatgat
gaggatgaggaggggtctcaggaggggcagataaaaagcgagaataccgatgatgagacc
agaagtcgagctgataaggaactccagctgagcgacctggacgattttgacacgctcgag
tctgaaagctctgagtgtgagatgaagcaccggtaccacatgaacacgcacatgtccacg
acgagcgactgctccgcagagcacctcgttaagaacgcgtctctgaagatctcagttccg
gtgccgctcggcggggagcaggacttgggtaaaagctgcatcaaaacgagtccggaggac
ttccagccggacagcatgcagcagcagcagccaaagtcgtgctacactcagcagcagcag
agtcaccaattattagacggcaagcctcgaatttggtctttggcacagacagccacgtcc
ctgaaccagactgaatatccgtcctgcatgctgaggtgccaggcgcctccctcctcactc
gcccagtcccccgccgccacttcccccgtgaccgtcctggataaccggcaggactcgccg
gtcaccacgttgaggaactgggtggacggggttttccacgaccccctgttcaggcacagc
actttgagccaggctctgaccaacacgaccgtctcctggaccacgaacaccaaaggcagc
gtgctggaggcggagaggagtgcggcggccctgcagcagcaccaggacccgcccaaagac
agtgccatgagtttcccaaaaactatcaacaaacttttttgctcctaa
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