KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129367445
Entry
129367445         CDS       T09758                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013  Nucleocytoplasmic transport
pprl04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    129367445 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    129367445 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129367445 (seh1l)
   04131 Membrane trafficking [BR:pprl04131]
    129367445 (seh1l)
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     129367445 (seh1l)
Membrane trafficking [BR:pprl04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    129367445 (seh1l)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EIPR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Caudo_TAP_N
Other DBs
NCBI-GeneID: 129367445
NCBI-ProteinID: XP_054897833
LinkDB
Position
Unknown
AA seq 416 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWQCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNATCGGKVQIYEYNENTRKYSKAESLITVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKESTATGPTKFEVQMVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMENWKCTGILKGDGSPLTGSSGQPTAMSTVVGSSVQNSQNILNGMSAGRYFF
PPLDPPRGGTRHGHLLPPSSLIEHCDAEPVVQPQQLALVHRRSSRALLSLPETEEQ
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgttcgtcgctcgcagtatcgccgctgaccataaagatctcatccacgatgtctcgtac
gattttcacggccgcagaatggcgacttgttccagcgaccaaagcgtcaaggtgtgggat
aaaagtgagaatggagagtggcagtgcacagccagctggaagactcacagtggatcagtg
tggcgagtgacctgggctcacccagagtttggccaagtcctggcctcctgctcgtttgac
cgaacagccgccgtgtgggaggagatcgtcggggagtccaacgacaagcagcggggcctg
agccactggatcaagagaaccacgctggtggacagcaggacatctgtgacggatgtgaag
tttgcgcctaaacacatgggcctgatgctggccacctgctctgcagacggcgtggtgagg
atctacgaggctccagatgtgatgaacctgagccagtggtctctgcagcacgagatctcc
tgcaagctcagctgcagctgcatatcatggaatccctcgagttctcgagcccacccccct
atgttcgccgtgggcagcgatgacagcaacgcgacgtgcggtggaaaggtacagatctac
gaatacaacgaaaacacgcggaagtacagtaaagcagaatcgctgattacggtcaccgac
gccgtccacgacatcgccttcgcccccaacctgggcagatctttccatgtgctcgccatt
gcaaccaaagatgtccggatatttaagctcgtccctttgaggaaggagagcacggctacc
ggacccacaaagtttgaggtccagatggtggctcagttcgacaaccataactctcaggtg
tggcgcgtgagctggaacatcaccagcactttgctggcctcgtctggagacgatggctgc
gtacgtttgtggaaagctaactatatggagaactggaagtgcacaggcatcctgaaggga
gacggcagccccctgacgggctcgtccggtcagcccacagccatgagcacggtggtgggc
tcctccgttcagaactcccagaacatcctgaacgggatgtcggcaggaaggtatttcttc
ccccctctggatcctcccagaggggggaccaggcatggtcacctgctgcctccgtcgtcc
ctcatagagcactgtgatgctgagcctgttgttcagcctcagcagctggctcttgttcac
aggcgctcctctagggcgctgctgtccctgccagaaaccgaagagcaatga

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