Poeciliopsis prolifica (blackstripe livebearer): 129367463
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Entry
129367463 CDS
T09758
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129367463 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129367463 (exosc6)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129367463 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129367463
NCBI-ProteinID:
XP_054898283
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MPTDTKRVRGPEASQSPLLFWSRPAEVLPSHGPREDGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKVLCCVYGPRETERKDETDMKSGRLTTDMRFAPFSCPERGSWIQGSQDKDF
SLMLQESLQPAVCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASMALSDAGIEMYDLVLG
CSLRQDGGSYVVDPTYPEENSWSSGSGEKRGGLTVAFLPSLNQVSGLQSDGEMAEETLTA
GIRTCIEGCYKLYPVVQQALIKAVRRAALPPAES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgatacaaagcgagttcgcgggcctgaggcgtctcagagtccgctcctgttc
tggtcccgacccgcagaggttctcccttctcacggacccagagaggacggtcgccagcgg
gaccaggttgacgtgcggccggtgtttgtccgctgcggcctagtgagtcaagctaaaggt
tccgcttacatcgaggctggaaacaccaaggtgctgtgttgcgtttacggaccgcgggag
acggagcggaaagatgagactgacatgaaatctggaagactgaccaccgacatgcgcttc
gctccgttttcctgcccggagcgcggctcctggatccagggcagccaggacaaggacttc
tccctgatgctccaggagagcttgcagccggctgtctgcctccataagtatccgcgctct
cagatcgaggtcaacgtcatggttctggagaacagcggctcggttctggcccacgccgtc
acctgcgcctccatggcattgtcggacgccgggattgagatgtacgacttggtgctggga
tgctccctgcgccaggacggcggctcctacgtggttgacccgacgtacccggaagagaac
agctggagctcgggcagcggggagaagcgaggcgggctgacggtggcgttcctgcccagt
ctgaaccaggtgtctgggctgcagtcggacggtgagatggcggaggagacgctgacggcg
gggattcggacctgcatcgagggatgttataaactgtatcctgttgtccagcaggctctg
atcaaggcggttcgcagggcggctctgccaccagcagagagctga
DBGET
integrated database retrieval system
