Poeciliopsis prolifica (blackstripe livebearer): 129367505
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Entry
129367505 CDS
T09758
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129367505 (tdrd12)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
129367505 (tdrd12)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129367505 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
129367505
NCBI-ProteinID:
XP_054897991
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MLEIFILKVENPSCLWGRVVCGANGSVETTERYTTLQAEMNIFYQDVTQDLHQLKPTSLE
EGQVYVVYCAVKKSWCRAVVRSVITDPTCNRAFCFLVDHGEMIVVSLDKIRVSLQKFLQL
PFWVRRFHLARIQPITLRVSVLAEKVELEPSRQWDFSATLYLHNLLRASTQTEAVLHELE
SDSTSIELYLTISNIKICVNDDLVANRFACYSSSGLDACDRFPLMLSPSVLTQTASKSSD
KQMELNLHSPKEHGGSSESPGTSEPGDWLTTPSLPQSQIPELVTCEEGSRSEDNKEPMFI
NNQTKHGPKASGAESVSSEETDFSLASALTKSLGLFRFLKFLNSGRDNQLEDKEQNQEGD
IRPEARCSDDDARSSHVGQNDDLNNCQPEMTEMSEAGTEQEQDAVSMFSETNLQSKIGEV
SQSILVESPGDVEASDFSTSVECGMRRSEEDGFCSRLLEWLNPEPFNSDPDAGDEVVSLG
DPWVKGILVHSALSIEPCNTLEDAPIADSLRQVLLQKNYRTLSPADRYSWPAVARGCNTF
IISQNADQPLCYLIPLLTHIFLNSLLVSHLSSSGPIAVLLCPGWEKAQMIYNLLEDSKVS
QILHPIIVLVGIGKDEAKAVKFPKNCLLIVTTPFTLVRLLSCHCFLFLRLYHLVLDEADQ
LFTFATDEMAAILQHFQKVTSSEEKAFCPRQLVAVAKRWTSPMEDLISNHMPHPSIIITV
PEEAALYGNIQQVILMTVESNKISALLGVLDFSPEVGQKTLIVTNSAEEVEDVFKAVSNK
SAFCLKIHKGLLDKLDDFVIQQWRKNVGPGTHVILVSTSECLRGLGIRDAACVVHYGFPP
SPKVFGYRLFCMAENFRSLLKQDQTDGGSSVSRSVLLISERNTRHVVGVLRYLERTDAPL
PPVLFSFAEGVHVAREDQKTDRPFCSYLKSFGFCRDRSVCPDRHRINPQSDQSALPSSGV
IEVLPLYIKTASVFYGRLVKQNDKEFDKMASEMMSYYADKKPGAKELLEGALYAVQEDET
FHRVKILVLPDHGESIFYNVLVQFIDIGKESDVKSHQILELPPQFHSLPNQAVEMVVCRV
KPADAEIEWHPKVTRAISKKIRGLQHRARAVQCLGNTVFVDPMVRVTQMPGTKTFINEYN
VQTEILKTGMGVNNPEHLDFFRAAVQDNSSKDEGHASSNEDRRLIYKSNPAASWSLHENG
EPDGDEQVVSRDETVCNDPRDETVCNDPRDETVCNDPRDETVCNDPRDETVCNDPRDETV
CNDPRNETVCNDPRDETVCNDPRETVCNDQSKSLYPQVVWYQTCDSVIVTVKLMNPESQR
CDFYSDRVVYSGRVNGRSYMADLELHQKIEADICHWEMKSNQPVLKLVKQQQGHWERLIR
SKNIFVSYDMDHVDDYEDKSSSCLFVENTGEDSCYLNSESSSDSD
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatattcattttgaaggtggagaatccatcatgcctctggggtcgggttgtt
tgcggtgccaatggcagtgtggagaccacagaacgttacactactcttcaggctgagatg
aacattttctaccaagatgtcactcaagatcttcatcaactgaaacccacttcattagag
gaaggacaggtgtatgtggtatactgtgctgtgaagaagtcatggtgtcgtgctgtggtg
cggtccgtcatcaccgacccaacatgcaatcgagctttctgcttcctggttgaccatgga
gaaatgattgtggtctccttagacaagatacgagtgtcattacagaagttccttcagctt
cctttctgggtgaggaggttccatctggcacgaatccaaccaataacccttcgagtatcc
gtacttgcagaaaaagtagaacttgaaccttctagacagtgggacttttcggctacactt
tacctgcacaacttgcttcgagcatccacccaaacagaagctgtgttgcatgagttggag
tcggactccacctccattgagctctatcttaccatcagcaacatcaagatctgtgtgaat
gatgacctggtggccaataggtttgcatgttacagcagcagtggcctggatgcctgtgac
agatttcctctcatgttgtcccccagcgtcctaacccaaactgcttccaaaagctctgac
aagcagatggagctaaacctgcattcgcccaaggaacatggagggtcatcagagagtcct
ggtacttcagaaccaggggattggctgacaactccctctctacctcagagtcaaatccct
gagctggttacttgtgaggaaggcagcagatcagaggataataaagaaccaatgtttatt
aacaaccaaaccaagcatggcccaaaagcttctggggcagagagtgtctcctcagaggaa
acagacttctctcttgcttcagcactaaccaaaagccttggtctgttcaggttcttgaag
tttctaaattctggcagagacaatcaactggaagataaagagcaaaaccaggaaggagac
atcagaccagaagccagatgcagcgatgatgatgcaagatcttctcatgtgggacaaaat
gatgacctgaacaactgtcaacctgagatgactgaaatgtctgaagctggcactgaacaa
gagcaggatgctgtcagcatgttctcagaaaccaatctgcaaagcaaaattggagaagtt
tctcaaagtattctagttgaaagtcctggggatgtggaagcaagtgatttcagtacgtca
gtggagtgtggaatgaggaggagtgaagaggatggattctgctcacgtcttttagagtgg
ctgaacccagagcctttcaactctgatcctgatgctggagatgaggtggtctcactcggt
gatccctgggtgaaggggattctagtgcattcagccctttccattgaaccatgcaacaca
ttagaagatgctcccattgcagattctcttcgtcaggtcttgcttcagaaaaactatcgc
actctttctccagctgatcgctacagttggccagctgtagctcgtggctgcaacactttt
attatctcccagaatgctgaccagccactttgctaccttatccccctgctcacccacatt
tttttaaactccctcctcgtatcccacctctccagttcagggcccatagcagtgctgctg
tgcccaggctgggaaaaggctcagatgatatacaacctgctggaggacagcaaggtttct
caaatcctgcacccaattattgtcttggtgggcattggcaaggatgaagccaaggctgta
aaattccccaaaaactgcctgctgatagtgaccacgccattcactcttgtccgtttgctg
tcttgtcactgctttcttttcctgcgactgtaccatctagtattagatgaggctgaccag
ctcttcacttttgcaactgatgagatggcagccatcctacaacattttcagaaggtgact
tccagcgaggagaaagcattctgtcctcggcaactggttgctgtggccaaaagatggacc
agtcccatggaggatctaatctctaatcatatgccccatccctccattattataactgtc
cctgaggaggctgcactgtatggaaacatccagcaggttatcctgatgacggttgagagc
aacaagatatctgcccttctgggagtgttggatttcagtcctgaagttggccaaaagaca
ctgattgttacaaattctgctgaggaggttgaagatgtgtttaaggctgtgagcaacaaa
tcagcattctgtctcaagatccacaagggattactggacaagctggatgactttgtcatc
cagcagtggaggaaaaacgttggccctggcactcatgtgatcctggtgagcaccagtgaa
tgcttgaggggccttggcatcagagatgcagcttgtgttgtccactatggatttccgcct
tctcctaaagtgtttggctacagactcttttgcatggctgaaaactttcgaagtctactt
aaacaagatcaaacagatggtggttcttcagtcagcagatcagtgctgctgatctcagaa
agaaatactcgccatgttgtgggagttcttcgttatttggaacgaactgatgcgccactt
ccacctgtactgttctcctttgctgagggggtgcatgtggcccgcgaagaccagaagaca
gatagacctttttgcagctacctgaagagctttgggttctgcagggacaggagtgtgtgt
cctgatcgtcacagaatcaaccctcagtcagatcagtctgctcttccttcatctggagtc
attgaagtcttaccgctctacattaagacagcctctgtcttctatggtcgtttggtcaag
cagaatgacaaggagtttgataaaatggcctctgagatgatgtcttattatgctgacaag
aaacctggagccaaagagctgctggagggagctttatatgcagttcaagaggatgagacc
ttccacagagtgaagattctggtgctacctgatcatggtgaaagcatcttttacaatgtc
ttggttcagttcattgatattggaaaggagagtgatgtcaaatcccatcagatccttgag
ctgccgccacagtttcattccctgcctaaccaagctgttgagatggtggtctgcagggtg
aagccagctgatgctgagattgagtggcatccaaaggtcaccagagcaattagcaagaag
atccgaggtctgcagcatcgagccagagccgttcagtgcctggggaatacagtttttgtc
gatcctatggtacgagtcactcagatgccaggcacaaaaacatttataaatgagtacaat
gtgcagactgagatcctgaagacggggatgggagtcaataatcccgagcatttagacttc
ttcagagcagcggttcaagacaacagcagcaaagatgaaggtcacgcatcaagcaacgaa
gacagaagactaatttacaaaagtaatcctgctgcctcttggagccttcatgaaaatggt
gagcctgatggtgatgagcaagttgtgtcaagggatgaaacagtctgcaatgaccccaga
gatgaaacagtctgcaatgaccccagagatgaaacagtctgcaatgaccccagagatgaa
acggtctgcaatgaccccagagatgaaacggtctgcaatgaccccagagatgaaacggtc
tgcaatgaccccagaaatgaaacggtctgcaatgaccccagagatgaaacggtctgcaat
gaccccagagaaacagtctgcaatgaccagtcaaagagtttataccctcaggttgtttgg
taccagacctgtgactctgtaattgtaactgtgaagttgatgaacccagagagtcaacgc
tgcgatttctactcagacagagttgtctacagtggcagagtgaacggacgttcctacatg
gctgatctggagcttcaccagaaaatagaagccgacatttgccactgggaaatgaagtcc
aatcagcctgttcttaaactggtaaaacagcagcaaggacactgggagagactcatcagg
agtaagaatatttttgtgagttacgacatggaccatgttgacgactacgaagacaaatca
tcaagttgtctgtttgtggagaatacaggagaggacagctgctatctgaactcggagagc
agcagcgacagtgactga
DBGET
integrated database retrieval system
