Poeciliopsis prolifica (blackstripe livebearer): 129367555
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Entry
129367555 CDS
T09758
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129367555 (sntb1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PH_9
Gln_amidase_like
Motif
Other DBs
NCBI-GeneID:
129367555
NCBI-ProteinID:
XP_054898063
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MAVVAAGAGVSSGSRAQKSGFIEVLVRENWHKVLANLSEEALTLSCEDCGVNDGVSSNGV
TNGSYLDNSNANSNNGPQAVRTAFTDLPERVPEAIANRKRCVKVVKQEIGGLGISIKGGK
ENKMPILISKIFKGLAADQTQSLYVGDAILSVNGMNLRDATHDEAVQALKRAGKEVTLEV
KYMREATPYVKKGSPVSEISWETPPPESPRPSSPPTASFSSSLPQSPGSPSQPFLSLNSD
RRCIPLKMSFVTRAMTRADPENRQLELHSPDARHTIVLRCPDQPSALSWFSSMHSVTSTL
AQQAAAEVVQNTSRTGVAGSKEIRHLGWLAGKTESEKQCWKPVLVVVTEKDLLLYDSLPR
SKEAWQNPSHNFPLLATRLVHSGPDRGSPCSGTELFFATRTGTRLGIETHLFRTETTKDL
SMWTRHIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEKGFSVLAEPKVEDGEDGEERV
IDTSVKPQVLLSYPFEKLKMSADDGVRMLLLDFGGKEGEIQLDLHSCPKPIVFILHSFLS
AKISRLGLVA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagcagcgggagcaggagtctcgagtggctccagggcgcagaaaagtgga
tttatagaggttttggtgcgggagaactggcacaaagttttggccaacttgagtgaggag
gcgctcacgttgagctgcgaggactgcggcgtcaacgacggcgtcagctccaacggggtg
accaacgggtcttacctggacaacagcaatgccaactccaacaacggcccccaagccgtg
cgcaccgcattcacggacctcccggagcgggtgcccgaggcgatcgccaacagaaagcgg
tgcgtcaaggtggtcaagcaggaaatcggaggactcgggataagcattaaaggggggaag
gagaacaaaatgcccatactcatcagcaagatattcaaggggcttgcagcggaccagacc
cagtctctgtatgtaggagacgccatcctctccgtgaacggaatgaacctgcgggacgca
acgcacgacgaggctgtgcaggcgctgaaacgagcaggaaaggaggtgacactggaagtg
aagtacatgcgtgaggctacaccctatgtcaaaaagggctcccctgtgtcggagatcagc
tgggagacgcctcctccagagtctccgcgccccagcagccctcccaccgcttccttctcc
tcgtccttgcctcagtctcccggctctcccagccaacctttcctgtctctgaacagcgac
cggaggtgcataccactgaagatgtctttcgtgacacgtgccatgaccagagcggatcct
gagaacagacaactggagctgcacagtcctgacgccaggcacaccatcgtgctccggtgc
ccagaccaaccatctgccctgtcctggttctcttccatgcactcggtcacatccacgctg
gcacagcaagcagcggcggaggttgtccagaatacatccaggacaggggtagctggcagc
aaagagattcgacacctgggatggctggcagggaagacggagagtgagaagcagtgttgg
aaaccggtcctggtagtggtaactgagaaggaccttttgctgtacgacagtttacctcgg
agcaaggaggcctggcaaaacccttcacacaactttccacttttagcaacacgtctggtc
cactctggtcctgaccggggatcgccgtgttctggcactgagctgttttttgccactcgg
actggcacgcgactcggcattgaaactcaccttttccggactgagaccacaaaggatttg
tccatgtggaccagacacattgtcaacggctgtcatgcatcggctgagatgatcaaagaa
gtcacaacaagttgcctgtaccagagtcaggagtgtcggctggtgattcactacgagaag
ggcttctctgtgctagctgagccaaaagtagaagacggggaggacggcgaggagagagta
attgatacatcggtaaaaccccaagtgctcctctcctacccctttgaaaaactaaaaatg
tccgcggacgacggcgtacgcatgctccttctggacttcggagggaaggagggagagatt
caactggatcttcactcgtgtccaaaaccgattgtcttcatcctccactctttcctgtct
gctaagatctcccgtctgggtctggtggcctga
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