Poeciliopsis prolifica (blackstripe livebearer): 129367612
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Entry
129367612 CDS
T09758
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
129367612 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129367612 (rag1)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129367612 (rag1)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129367612 (rag1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_10
U-box
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129367612
NCBI-ProteinID:
XP_054898143
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MAAENPETDGPRSFMPAELQHPHSKYSQWKFKLFRVKSMEKAPLPSETQTEIGASLGISP
PTAPNIEADHGGGLASVMKLCLGGKSKENVEGASKRIDMKLQEMDTHMNHLRCLCRICGM
ILRKVKGPVHDVHGDLDDASKCVLRKMGCKFTSWPDILLKVFKVDVTEDAESIHPLSFCH
RCWLAAIRGGGVCSFTRTKVPEWKPHTSHCYVCSPKKSSFQRTGRKRRKVVPKVQSLAKR
ARWDHGDTIAVGEKKALRPFGDRHNPVLRAWKKNGIQREKWVKNITHCQNDHLNTKLIAE
KLPTDFIISFTCLVCDHLLCDPVQSPCGHLFCRSCIIKFTHVLGPHCPSCNLSCAPDDLI
PPAKTFLSTLYSLPLLCPCEGCGEHVQLGLFKAHCLNHELEPGTNKYSSQFQSYLLTNKG
GRPRQHLLSLTRRAQKHRLKDLKNQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQAD
ELEAMMQGRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKE
LLPGFHQFEWQPALKNVSTSCNIGIINGLSGWTSSLDDSPADTITRRFRYDVALVAALKD
LEEDIMEGLRDTGMEDSACTLGFRVMIKECCDGMGDVSEKHGGGPAVPEKAVRFSFTVMS
VSIQAEDEQEEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKESR
LILSMGGMPRSFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEASRNMVLHSI
TRSHDENLERYEIWRTNPFSESVDELRDRVKGVSAKPFLETQPTLDALHCDIGNATEFYK
IFQDEIGEVYKNPNPSREDRRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTMEAAEVV
CELVPSEERREVLRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSATFKY
RYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELED
VLKHHWLYTSKYLQKFMEAHKDSAKAFQATIDPEEIQDDEDLTPEIVGF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaaacccagagacagacggtcccagatccttcatgcctgctgagctccag
catccccactctaagtattctcagtggaaattcaagctgtttagggtgaaatctatggag
aaggcacctctgccgagtgagacacagaccgagataggagcttcattagggatctcacct
cctaccgctccaaatatagaagcagatcatggagggggactggcgagtgttatgaaattg
tgcctggggggaaaaagcaaagaaaatgtggaaggcgctagcaagagaattgatatgaaa
ctgcaggaaatggacacccacatgaaccatctcaggtgcctgtgccgcatctgtggaatg
atcctgaggaaggtcaaaggacctgtgcatgatgtccatggtgatctggatgatgcaagc
aagtgtgtgctccgcaaaatgggttgcaagtttactagctggccagacatccttctgaaa
gtattcaaggtggatgtgacagaggacgcagaatccattcaccctctttccttctgccat
cgctgctggcttgccgccatacgaggaggaggggtctgcagtttcactagaacaaaagtc
ccagagtggaagccccacacctcccactgctatgtgtgctcccccaaaaagtcatcattt
caaaggactggaagaaagaggaggaaggttgttcctaaagtccagagtttggccaaaaga
gccaggtgggaccacggtgacaccattgctgttggtgagaagaaagcccttagacctttt
ggagaccgccacaatcctgtgctgagggcctggaaaaaaaatggtatccagagagaaaag
tgggtaaagaatatcacacactgccaaaatgaccacctgaacaccaaactgattgcagag
aagctccctacagattttatcatttctttcacctgccttgtgtgtgaccacctgctctgt
gatccagttcagtccccctgtgggcatctcttctgccgcagctgcattataaaattcacc
catgttctgggaccccactgcccttcatgcaacctttcttgtgcccccgatgatctcatc
cctcctgccaaaacctttttatcaactctgtactctctgcctctgctgtgtccctgtgaa
ggttgcggtgagcatgtgcagttaggcttgttcaaggcccactgtctaaaccatgagttg
gagccgggtacaaacaaatactcatctcagtttcaaagctacctgttaaccaataaggga
ggaagaccccgccagcacttgctctccttaacccgtcgtgcccagaagcaccgactgaag
gatctgaagaaccaagtgaaggtgtttgcagacaaagaagaagggggtgatctgaagtct
gtgtgcttgacactgtttctgctcgctctgagatctgggaatgaacaccggcaggcagat
gagctggaggccatgatgcaaggcagaggctttggattgagtcctgccgtgtgcctggcc
attcgggtcaacactttcctgagctgcagccagtatcataagatgtatcggacagtcaaa
gctacaagtggccgccagatctttcagcccttgcacaccctcagagctgcagaaaaggaa
cttcttcctggctttcaccagtttgaatggcagccagctctcaaaaacgtgtccacatct
tgtaatattggcatcataaatgggctgtcaggttggacatcttcattagacgactcccca
gctgacaccatcacccggcgctttcgctatgatgtggcacttgttgcagcactgaaagac
cttgaggaggacatcatggagggcctgagagacactggaatggaagatagcgcttgcacc
ttgggctttagagtcatgatcaaggagtgctgtgatggcatgggtgatgttagcgaaaag
catggtggaggaccagctgttcctgagaaggctgttcgcttctctttcactgttatgtct
gtctccatccaggctgaagatgaacaggaggaggtcacaatttttacagagccaaagccc
aattctgaactatcctgtaagcccctgtgccttatgtttgtggatgagtcagaccacgag
actctcactgctgttttggggcccatagttgcagagcgaaatgcaatgaaagagagcagg
ctcattctatctatgggtggcatgccacgctcctttcgcttccacttcaggggcacaggc
tatgatgagaagatggtgcgtgaaatggagggcctggaagcttcaggatctacatatatc
tgtactttgtgtgactccagtcgagcagaggcatctcgaaacatggtgctacactccatc
acccgcagccatgatgagaatctggaacgttatgaaatatggagaaccaaccccttttct
gagtctgtagatgagctacgagacagagtgaaaggcgtttcggccaagccctttctggag
acccagcccacgctagatgcattgcactgcgacataggcaatgccactgaattctacaaa
atcttccaggatgaaattggagaagtgtataaaaaccccaaccccagcagagaagatcga
cgcagctggagggcagccttggataaacagctgaggaagaagatgaagcttaaaccagtg
atgaggatgaatgggaactatgcccgaaggttaatgaccatggaggctgcagaggtggtt
tgtgaattggtgccctcagaggagagaagagaggtcctgagggaactcatgaggctctac
ctccagatgaaacctgtgtggcgtgccacctgtccagccaaggagtgccctgaccagctg
tgccgctacagttttaactcccagcgctttgccgacctgctctctgctaccttcaagtac
aggtacaatggaaaaataacaaattacctgcacaagaccctcgcccatgtgcctgaaatc
atagagagagatggatctattggagcctgggccagcgaggggaacgagtcggcaaacaaa
ctgttcagacgtttcaggaagatgaatgcacgtcagtccaaggcctttgaactagaagat
gtgctaaaacaccactggctctacacttctaagtacttgcagaagtttatggaggctcac
aaagactctgctaaagctttccaggcaacaatagatccagaggaaatccaggatgatgaa
gatttgactccagaaattgtcgggttttga
DBGET
integrated database retrieval system
