KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129367637
Entry
129367637         CDS       T09758                                 
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pprl03009]
    129367637 (dcaf13)
   04121 Ubiquitin system [BR:pprl04121]
    129367637 (dcaf13)
Ribosome biogenesis [BR:pprl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    129367637 (dcaf13)
Ubiquitin system [BR:pprl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129367637 (dcaf13)
SSDB
Motif
Pfam: Sof1 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_IFT140_1st eIF2A Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 KNTC1_N NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 129367637
NCBI-ProteinID: XP_054898194
LinkDB
Position
Unknown
AA seq 445 aa
MKVKILSRNPDDYVRETKHDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPRSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRHC
GTSFFTIGDDKTIKQWKMEAPGYGEEEEPLNTVLGKTVFTGLDHHQKNAVFATCGHQVDI
WDEQRSTPIRSFSWGVDSFSSVRFNPVETDLLGSCASDRSIVLYDMRESTPLKKVIMTMR
TNTISWNPMEAYYFTCANEDYNLYTYDMRHLENPVKVHVDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKNSASSREVYHTRRMQHVICVKWSADSKYVLSGSDEMNIRLWKANAAEKL
GVLSPREKQAIHYSQKLKEKFQHHPQIKRIARHRHLPKVIYHQRNELRVMKEARRRKEMN
VRKHSKPGSVPVVSEKEKHVVSVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggtcaagatcctttcaagaaacccggatgattacgtccgggaaactaaacacgac
attcagcgagtccccaggaactacgacccctccctgcatcccttcgaggtgagccgagag
tacacgcgggccctgaacgccacaaagttggagcgcgtgttcgccaagcctttcctggcc
tccctggacggacacagagacggggtgaactgcctggccaagcacccccggagtctctcc
accctgctctctggctcctgcgatggagaggtcaaagtgtggaatcttaccaaacacgag
tgcgtacgcactctccaggcccacgaagggttcgtccggggaatggtcgtcagacactgc
ggtacctccttcttcacgatcggagatgacaaaaccataaaacagtggaaaatggaagcg
ccgggctacggagaggaggaggagcctctcaacaccgtccttggcaagaccgtgttcacg
ggactggaccatcaccagaagaacgctgtgtttgcaacatgcggccaccaggtggacatc
tgggacgagcagaggagcacccccatccgctccttcagctggggtgtcgacagcttcagc
tccgtccgttttaaccctgtggagacagatctccttggaagctgtgcctctgacagaagt
atagttttatatgacatgagggaatcaacacctcttaaaaaggtgatcatgacaatgagg
accaacacgatcagctggaacccaatggaagcttattacttcacttgtgcaaatgaagac
tacaatctgtacacatacgacatgaggcatctggagaatcccgtcaaagtgcacgtggac
cacgtctccgccgtgctggacgtcgactactctcccaccggacgggagtttgtctccgcc
agcttcgacaagaccatccgcatcttccccaaaaactcggcaagcagcagagaagtctac
cacaccaggcgcatgcaacacgtcatctgcgtgaagtggtcagcggacagcaagtacgtc
ctgagcggctcggacgaaatgaacatccggctgtggaaggcgaacgcggcggagaaactg
ggagtgctgtctcccagagagaagcaggccattcactacagccagaagctgaaggagaag
ttccagcaccacccacagatcaagcgcatcgctcgccaccgacacctgcccaaggtcatc
taccaccagaggaacgagctgagggtcatgaaggaggcccgccggcgaaaggagatgaac
gtccgtaagcacagcaaaccaggaagcgtgcctgtggtgtctgagaaggagaagcatgtc
gtcagtgtggtgaaatag

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