Poeciliopsis prolifica (blackstripe livebearer): 129367736
Help
Entry
129367736 CDS
T09758
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129367736
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129367736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
URGCP_GTPase
ABC_tran
BrxC-PglY_N
AAA_30
AAA_18
MeaB
Motif
Other DBs
NCBI-GeneID:
129367736
NCBI-ProteinID:
XP_054898351
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGERDGPPGQNLSGPSRDREYQPRERRDGSEDPPGPLIQ
KTPIILAKPPSERAKPSQNVPVSGAPLLEKPIMLMKARDDGGKPGTPPEIAAQSSGPGPS
KVEREGQRPTQPVYQIQNRGMGASASGNAVDPMVGQSKLLHPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANTPEEDQRSYVFRPQSQEIKERGGNQ
STGIDFFITQERVIFLDTQPILSPFILDHVINNDRKLPPEYNLPHTYVEMQSLQIAAFLF
TVCHVVIVVQDWFTDINLYRFLQSAEMLKPSTPSASHDSTGSSGSDDGAEYYPHIVFLQN
KSRREDFCPRNVKNMHTVVDKLMAYSHLKYKGTLSMLDCNIFPGLAQEYLDTEVNMFLLP
VQENDGEDNLNKTGAGTYPLFSLLPGYRGHPTFSTMVSKLRSQILAMPRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccggtcacagccagcccgggatgtacgggcaagggaggagaaggaggcga
cgccggggagagcgagatggaccccctggacaaaatctgtctggccctagtcgcgatcga
gaataccagccgagagaacgaagggatggaagtgaggatccaccaggccccctcatccaa
aaaacacctatcattcttgcaaagcctccaagtgaaagggccaaaccatcccagaatgta
cctgttagtggagctccactcctggaaaagcccataatgctgatgaaagccagggatgat
ggagggaagccagggacacctcctgagatagcagctcagtcttctggtcctggaccttct
aaggtagaaagggaaggtcagagacccacacaacctgtttatcagatccaaaaccgagga
atgggggcttctgcatctggcaatgctgtggaccccatggtcggtcagtctaaactcctt
catccagagaaaatgaagcacagtattaagctggtggatgatcagatgaattggtgtgac
agtgccatggagtatctgagagatcagacagacatgttggtggtgggagtcattggcctg
caaggaactgggaaatcaaccattatgtcactgctatctgccaacacacctgaggaagat
caaaggagttatgtctttagaccccagagtcaagaaattaaggaaaggggaggcaatcag
agcacaggtatagatttcttcatcactcaggagagagtcatctttttggatacacaacct
attctcagcccgtttatacttgaccacgttatcaacaacgacagaaagctgcccccagag
tacaaccttcctcacacatatgtggaaatgcagtctcttcagatcgctgccttcctgttt
actgtgtgccacgtagttatagtggttcaagactggtttactgacataaacctgtacagg
tttctgcagtctgctgagatgttgaagccttccaccccatctgcaagccatgacagcacc
ggctcctccggcagcgatgatggtgcagagtactatcctcatattgtttttctccagaat
aagtccagacgggaggatttctgtccgagaaatgttaagaacatgcatacggtggtggat
aaattgatggcatattcccatcttaaatacaaaggtacattgtctatgttggactgcaac
atttttcctggactggcacaggaataccttgacactgaagtcaacatgtttctgcttccg
gtccaagaaaatgatggagaggataacttgaacaaaacaggagcaggaacatatccactg
ttctctctgctgccgggttatcgaggtcaccccaccttttccaccatggtctccaagctc
cgcagtcagatcctggccatgcctcgctgtcagctgtcccacaccattctcaccgagaaa
aactggtttcactacgctgcgcgtatctgggacggtgttaaaaagtcgtcagccctgtct
gagtacagccgcctcctctgctaa
DBGET
integrated database retrieval system
