Poeciliopsis prolifica (blackstripe livebearer): 129368210
Help
Entry
129368210 CDS
T09758
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03020
RNA polymerase
pprl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129368210 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129368210 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129368210 (polr3a)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129368210 (polr3a)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129368210 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
129368210
NCBI-ProteinID:
XP_054899064
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRKQAHIQVVSKNLYSQDNKRTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
DKQQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTICLNCGAFNGSVKKCGLLKIIHEKYK
TTKKVVEPFVSDFLQSFDIAIEHNKLMEPLLPRAQENLNPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPDIHPGANF
IQTRHTQIKRFLKYGNREKIAQELRIGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKIRISLPRPAIIKPIALWTGKQI
FSVILKPSKDCPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGTGLLKAKQDLLDDG
YRKCDEYIEALQTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPNEPALSQNELVLTADNIMKKADFLC
CRDSFLEELTETGAEKYLEEIKKFIKTMSERIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLGTCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPSDIAVHGEAVVCVSPRENNKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNMRAVMATHGVNGSRTTS
NNTYEVERTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPTPVTRPLLFDNADFHIPLFT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcagagaaacagatgtggcgaagaaaataagccacatctgcttt
gggatgaaatctgcagaacagatgcgaaagcaggcccacatccaggtggtcagtaaaaat
ctgtacagtcaagataacaaacgcactcctttgccttatggagtgttggaccaccgaatg
ggaaccagtgagaaagacagaccttgtctgacatgtgggaaaaatctggccgattgttta
ggacattatggctacctggatttggagctgccctgctttcatgttggctacttcaaagca
atcattgggattttgcagatgatttgcaagacatgttcgagtataatgctgaccaaagag
gacaaacagcagttcatggattacttgaaacggccaaacctggcctacctgcagaaacga
gggctgaagaagaagatctctgataaatgccgcaaaaggacaatttgcttgaactgtggc
gctttcaatgggtctgtgaaaaagtgcggcttgcttaagatcatccatgagaagtataaa
acaaccaaaaaggtggtggagcccttcgtgtctgattttctgcagtcctttgatattgcc
attgagcacaacaaattaatggaacctttattgccaagggcacaggaaaatttgaaccct
ctagttgttctcaatctgtttcggagaattcctgcagaagacatccctctactgttgatg
aatccagaggcggggaaacctgcagatctcattatcacccgtctgcttgtgccgcctctc
tgcatccgaccgtcagtggtcagcgatctgaagtcgggtaccaatgaggacgatttgacc
atgaagctgacggagataatcttccttaatgatgtcatcaaaaaacatcgaatgactgga
gcaaaaacccagatgataatggaggattgggacttcctgcagcttcagtgtgccctttac
atcaacagtgaactttctggcattcctctcaacatggcacctaaaaagtggaccagaggc
tttgtgcaaagactaaagggcaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttttctggaagaactgtcatttcccctgatccaaacctaaggattgatgaggtt
gctgtccctgttcacgtggctaaaatcctgacatatccagagaaggtaaacaaagccaat
ctggaactaatgaggaagcttgttcgcaacggcccagacattcaccccggagccaacttt
atccagactcgtcacacacagataaaaagatttttgaaatatgggaaccgtgaaaagata
gctcaggagctgaggattggtgacgtggtggaaagacatctgattgatggagacattgtc
ctcttcaatcgacagccttctttgcacaaactcagtattatggctcacatcgctaaagtc
aaaccacacaggacatttcggtttaatgagtgtgtgtgcacgccgtacaatgccgacttt
gatggagatgaaatgaatctccacctgcctcagactgaagaagccaaagctgaagccctg
gtcctgatggggactaaagctaaccttgttacaccaagaaatggcgaacctctgattgct
gctattcaggacttcctgacaggtgcgtacttgttgacgctgaaggacaccttttttgat
agatcgaaagcctgccagattgttgcatcaatacttgtgggaaaagatgaaaaaatcagg
atctctctccctcgccctgctataataaagccaattgctttgtggacaggtaaacagatc
ttcagtgtcattttgaagccgagtaaggattgtcctgtcaatgcaaacttgcggaccaaa
ggcaaacagtactgcggtaaaggagaggatctctgtcacaacgactcgtttgtggtgatt
cacaacagtgagctgatgtgtggaagcatggataaggggactctggggtccggctcaaag
aacaacattttctacatcttgttaagagactggggacagctggaggctgccaacgccatg
tcccgcctggcaagactcgctccggtctatctctccaacagaggcttctctattggaatc
ggtgatgtgactcctgggacgggtttgttgaaagccaaacaagacctgctggatgacggc
tacaggaagtgtgatgaatacatcgaagctctgcagacaggcaagctgcagcagcagcct
gggtgctcagcagaggagaccctggaggctctcatcttgagagagctttctgtgatcaga
gaccgagctggaagtgcctgtctgagggagcttgataagagtaacagccccctcattatg
gctctttgtggttccaaaggatccttcatcaatatctcccagatgattgcctgtgtgggt
cagcaggctataagtggctctcgcgtcccagatggttttgaaaaccgctccttacctcac
tttgaaaaacactcaaaactgcctgctgccaagggttttgtggccgacagcttctattct
ggtctgacgcccactgagttcttctttcacaccatggccggtcgagagggtctggtggat
actgctgtcaaaacggcagagaccggatacatgcagaggcgtctcgtgaagtctcttgag
gatttgtgctctcagtatgacctgacggtgcgcagctccacgggtgacatcatccaattt
atttatgggggcgatggcctggatccggctgcaatggaaggaaaagatgagccgctggag
tttaagagagttctggacaatattagggcagtctatacttgcccaaatgaacctgccctc
agtcagaatgagctcgtcctcaccgctgataacatcatgaaaaaggcagactttttgtgc
tgcagagacagcttcttggaggaattaacagagactggtgcagagaagtacctggaggag
ataaagaaatttataaagaccatgtcagagagaatcaagaagaccagagacaagtatggc
atcaatgataacggaaccactgagcccaaggttctgtaccagttggaccgaattacccca
acccagctagagaagtttttaggaacctgcagagacaagtatatgagagctcaaatggag
ccaggttcagcagttggagctctctgtgcccagagcattggagagccaggcactcaaatg
acactgaaaacctttcactttgctggtgtggcgtcgatgaatatcactctgggggtgcct
cgcatcaaagaaattattaatgcttccaagaatataagcacccctataatcacagctcac
ttggatgtggaagacgacgcagactttgcccggctggtgaaggggagaattgagaaaacg
cttctgggagagatttcagagtacattgaagaggttttcctcccagatgactgcttcatc
ctggtgaagctgtcactagagagaataaggctgctgcggttggaggtgaatgcagaaaca
gtgcggtactcaatatgcatgtcgaagctgcgagtgaagcccagcgacatcgccgtgcac
ggtgaggcggtggtctgcgtgtcgccacgggagaacaacaaaagctccatgtactatgtt
ctccagtcgttaaaagaagaacttccaaaggtggtggttcaggggatacctgaagttgcc
cgagcagtcattcacatcgatgaacaaagtggaaagaacaaatacaaactcctggttgaa
ggcgacaacatgagagctgtcatggccacgcatggtgtcaacgggagccggaccacctca
aacaacacatatgaggttgaaaggactttgggtattgaggctgcaagatccaccatcatt
aatgagatccagtacaccatggtgaaccacggcatgagcattgatcgccgtcacgtcatg
cttctggcagatctcatgtcctacaagggggaaatcctgggaatcaccaggtttggactc
gccaaaatgaaggagagtgttctcatgctggcttcatttgagaaaacagccgaccacctc
tttgatgccgcctacttcggtcaaaaagactccgtctgcggtgtgtctgagtgcatcatt
atgggaattccaatgaatatcggaacaggattgtttaaactcctacacaaggctgacaag
gatcccactcccgtcaccaggccgctcctctttgacaacgcagactttcatatacctttg
ttcacgtag
DBGET
integrated database retrieval system
