Poeciliopsis prolifica (blackstripe livebearer): 129368439
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Entry
129368439 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129368439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129368439
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129368439
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129368439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3H2C3
zf-C3HC4_3
FANCL_C
Motif
Other DBs
NCBI-GeneID:
129368439
NCBI-ProteinID:
XP_054899382
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MTVPLRRLAGLWPWLLMAALQVVLGQPSMESELRAVINVTLVKDPTGKPIVLKGEFVGGS
AGNAQGKLKQYHPVSLCNTSEDERQDSGFITIVKLEQLGPHCSPLLDKARIALDRGAQAV
IFDVSDVAIADAELKNTDSLPHPVVLIKGVDAKKLMNLVNHNEEATVVIEAKVEPKWPHY
DVSILLTIVLVILTIILIFAFRYKCKSNRTWDSVHQQTVQAISRLETRIYRSQSCSGSQR
HHGAWGSASSSNSSPVCAICLEEFQDGQNLRIISCAHEFHRDCVDPWLMQHRTCPLCMHN
IMGTERQPQRNRNQQSSEQSQSFLHPQQYSNPHSHPFPQHAIPFSMRPHYPRGPSGPYPN
LGHYSGSSPMDAQTLHFLSSRQLGASCGFHLPVDVPGRPHRLGAGCRTSAHHYASRRSCH
TYRSSCQAQRNASGSRLQHGSSVAAQSRGVAGNGRQDDGSCSGGSYHTERSGYLADGPAS
DSSSGPWHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFGYFGAGPAAGVGSGHA
PRRNSLEAAAQNRPKSLDSVVNKAGCLEEQPQTVFSHIHYHRHRHHHYEEGEHGQGPSRG
SDEEQGAAPSVPGQDKDSPACPPKHSPCHCPKPEPTDRPSPGTERQELDQTGPPVIVPPI
PLQLQSRCCHQGHGHPPAPRVGGCLLDGPSVHFHQSLDLQDDRSIHIHYGQSPAYCCPPP
ELHPALLPVPLILDSAGIEEWPCCGGAHVVWQRQVQQAHSEPQLMGPGTSMDRPPCRFHQ
GSSAERNTDICLYCQSIKHNQGSEEESGV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccctctgcggcgcctcgccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgagcatggagtcggaactccgagctgtcatcaacgtgact
ctggtgaaggatcccacggggaagcccatcgttctgaaaggggagttcgtgggaggaagt
gcgggcaacgcgcaagggaagctgaagcagtatcacccggtgtctctgtgcaacacaagc
gaggatgaacgacaagacagcggcttcatcaccatcgtcaagctggagcaattaggtccc
cactgctcgccgctgctggataaggctcgcatagcgttggacaggggcgcccaagctgtt
atcttcgacgtcagcgacgttgccatcgcagatgccgagctgaagaacacggactccctg
ccccatccagtggtgctgattaagggagtggatgctaagaagctgatgaatctggtcaac
cacaatgaggaggccacagttgttattgaggccaaggtggagcccaaatggccgcattat
gatgtgagcatcctgcttaccatcgtcctggttatcctcaccatcattctgatctttgct
ttccgctacaagtgcaagtccaacagaacttgggactccgtccatcagcagacagtgcag
gccatcagtcggctggagaccagaatctaccgctcccagagctgctccggctcacagcgc
caccatggggcctggggctcggccagcagctctaactcgagccccgtctgcgccatctgc
ctggaggagtttcaggacggccagaatctgaggatcatctcttgcgctcatgagttccac
agagactgtgtggatccctggctgatgcagcaccgcacctgtcctctctgcatgcacaac
atcatgggaacggagcgtcagcctcagagaaacagaaaccagcagagttcggagcagagc
cagagcttcctgcacccgcagcagtacagcaaccctcacagccacccgttcccccagcac
gccatccccttctccatgaggccccactacccccgcgggccttctggaccctaccccaac
ctgggccactacagcggctcgtctcctatggacgctcagaccctccatttcctcagcagt
cggcagctaggcgccagctgcgggttccacctcccagtggacgttccggggcgaccccac
aggctcggagccggctgccggacctccgcccatcactacgcgtcgcggcgctcctgccac
acctaccgctcctcctgtcaggcccagcggaacgcatccggctccaggctgcagcacggc
tcctcggtagcggcgcagagccggggggtggcgggcaatggccggcaggacgatgggagt
tgctctggaggcagctaccacacggagcgcagcgggtacctggcggacgggccggccagt
gactccagctcgggaccctggcacggctcctccagtgactctgtcctcaactgcacggac
gtgtccctgcagggcgtttatggcagctggtccacattccgcagctctctgagcagcgac
tatgatccgttcgggtacttcggggcaggtccggcagccggagtggggagtgggcacgcc
ccacgcaggaacagtctggaggccgcggctcagaaccggcccaagtctctggattctgtt
gtgaacaaagcaggctgcctggaggagcagccgcagactgttttcagccacatccactac
caccggcacagacatcaccactacgaggagggggagcacggccaggggccgagcaggggc
tcagatgaggagcagggggccgccccctccgttccgggtcaggacaaagactccccggcg
tgccccccaaaacacagcccctgccactgcccaaagccagagcccaccgatcgacccagc
ccagggacagagcggcaggagctcgaccaaacgggaccgccggtcattgttcccccgatc
cccctgcagctgcagtcccgctgctgccaccagggccacggacacccccccgcccctcga
gtggggggctgtctacttgatggaccctccgttcactttcaccagagcctggacctccag
gacgaccgcagcatccacattcattacggccagagcccggcctactgctgcccgccgcca
gagctgcacccggccctgctccccgtgcccctcatcttggactcggcggggatagaggag
tggccgtgctgcgggggggctcacgttgtgtggcagagacaggtgcagcaggctcactca
gagcctcagcttatggggcccgggacctcaatggacaggcccccctgcaggttccaccag
gggtcctctgctgagcgcaacacggacatttgtttatactgccaatctataaaacataat
cagggatcagaagaggagtctggggtgtga
DBGET
integrated database retrieval system
