Poeciliopsis prolifica (blackstripe livebearer): 129368477
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Entry
129368477 CDS
T09758
Symbol
trpv1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129368477 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129368477 (trpv1)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129368477 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
129368477
NCBI-ProteinID:
XP_054899440
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MRKSEISDFHLEADDRTEEEKRKQKAPEDGLASALGLSKEAPKAPMDTDYQEEMEPVKPQ
IRFNLNFDKGIRGEASQPKRDSSTFNIERLFEAVGSRDVSKLDGLYQYLHQNMKKLSDSL
YQSYGKTALMKALLHLKDGKNETIEELVKVSERIGDIKEFLNSAFTDSYYKGQTALHIAI
ERRSMSYVKLLVSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAACTNQPDIVSYLLEN
EYPADAKMADSHGNTVLHALVLVADNSKENTEFITAIYDLILKTTARLHPKIKLEERENN
NGLTPLKLAAKNGKIGVFSHILQREFQENHFKHLSRKFTEWVYGPVHXVLYDLSSVDSYE
NNSVLDILVYGSEIPNRHEMLEKEPLSCLLEDKWKKFGGGMFFFNFLVYLVYLIIFTVVA
YNKKDATQLPFIPEDALDYLYVLGQLMTLLANCYFFIIGIIEMKRKRPKLQTLLIDGYYE
ILFFTQGLLFLVATALYWAGRQEYLGFLVICLALSWVNVLYYSRGDKHMGIYSVMIQKMI
LSDILRFLFVYIVFLFGFSAAVVTLLIQPPPENRTGQGRQGFFTTSKPDTECFTPSYRNI
SYTTLQLFKFTIGMGDMEFTQDYQYMEVFYVLLILYIILTYILLLNMLIALMSRTVEKIT
MESASIWRLQRALTILEMERRIPCCLKNSFRSGVERKLGTAFGDDRRRCFRVEEMNWNKW
NTNLVKISEDPGCRDRSQQPDLDSPTKGFNRGRSWRGIFLEGTWRRRRTPESTEMSPLYI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatcagagatttctgatttccacctggaggcggacgacagaacggaggaggag
aaacggaagcaaaaggcaccagaggatggcttggcttctgctttaggtttgagcaaggag
gctcctaaggcccccatggacaccgactaccaggaggaaatggagccggtcaagcctcag
atccgattcaatctcaactttgacaaagggattcgaggtgaggcatcacagccaaagaga
gacagctccactttcaacattgagcgtctgtttgaagcagtgggcagcagagacgtcagc
aaactggacggcctgtaccagtacttgcatcagaacatgaagaaactctctgactctctg
tatcagtcttacggtaaaaccgccctgatgaaagctctactgcacctcaaagatggcaaa
aacgaaaccatagaggagctggtcaaagtttcagagaggatcggcgacataaaagagttt
ctgaactccgccttcacagatagctactataaaggtcagactgctcttcatatcgccatt
gagaggagaagtatgtcttatgtaaagctgcttgttagcaaaggtgccgatgttcacgcc
aaggcctgtgggaagttttttcagcctcatgatggtcccaacttctactttggtgagctg
cccctgtctctagcagcctgcacaaaccagcctgacatcgtgagctacttattggagaat
gagtatccagcggacgccaagatggcagactctcatggcaacacagtgttgcacgccctg
gtgttggtggccgataactcgaaggagaacacagaattcataacggccatttatgatctt
atcctaaagaccactgcccgactgcatcccaagataaagctggaggagagagagaacaac
aatggactcacacctctcaaactggctgccaagaatggcaagattggggtattttctcac
atcctgcaaagggaattccaggagaatcacttcaagcacttgtcccgtaaattcaccgag
tgggtttacggacccgtccacnnagttctgtacgacctgtcctctgtggactcatacgag
aacaactctgttctggacattctagtctatggcagtgaaattcccaaccgccacgagatg
ctggagaaggagccgctcagctgcctcctggaggataagtggaagaagtttggaggtgga
atgttttttttcaacttcctggtctaccttgtgtatctgatcatcttcactgttgtagcc
tacaataaaaaagatgcaacacagcttccgtttatccctgaggacgccttggattacctg
tatgttttaggccagctgatgactttactagcaaactgctatttctttatcattgggatt
atagaaatgaagaggaagaggccaaagctgcagacactgctgattgatggatattatgag
attctcttcttcactcagggtttactgttcctggtcgccactgctctgtactgggcaggg
aggcaggagtacctgggcttcctggtgatctgtctggctctcagctgggtgaacgtgctg
tactactccaggggcgacaaacacatgggcatctacagtgtcatgatacagaagatgatc
ctcagcgacatcctgcgcttcctttttgtttacattgttttcctctttggattctctgca
gccgtggtcacactgctcatacaacctcctcctgaaaacagaacaggacaagggaggcaa
ggattttttactacctccaaacccgacacagagtgtttcacgcccagctacagaaacatc
tcctacacaaccctgcagctcttcaagttcaccatcggcatgggcgacatggagttcacc
caggattaccagtacatggaggtcttctacgtcctccttatcctctacatcattctcacc
tacatcctgctcctcaacatgctcatcgccctaatgagccgcacagtggaaaagatcacc
atggagagcgccagcatttggaggctgcagagggctctcacaatcctggagatggagagg
cggataccctgctgtctgaagaacagttttcgctctggggtggagagaaaactcggcacc
gcttttggagacgatcgtcgaaggtgtttcagggtcgaggagatgaactggaacaaatgg
aacaccaacctggttaagatcagtgaggatccaggatgccgtgatcggagccagcagcct
gatctggacagccctaccaaaggatttaacagagggaggagctggagaggcattttcttg
gagggcacttggaggaggaggcggacgccggagtccaccgagatgagccccctgtacatc
tga
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