Poeciliopsis prolifica (blackstripe livebearer): 129368493
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Entry
129368493 CDS
T09758
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129368493 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
129368493 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129368493 (thoc2)
03041 Spliceosome [BR:
pprl03041
]
129368493 (thoc2)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129368493 (thoc2)
Spliceosome [BR:
pprl03041
]
Complex C
Other components
EJC/TREX
129368493 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129368493 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
129368493
NCBI-ProteinID:
XP_054899465
LinkDB
All DBs
Position
Unknown
AA seq
1558 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGNETKDIQAALYEVCSQVVQGNLKI
DLVSAVLGEMMELRDDLPSILADVFCILDLETGALEEKNKRDHYTHLVGACLSFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSNLVLESIKSLIGCFNLDPNRVLDIILEVYESRSEQDEFFLSLIKSYMCEPITLC
HILGFKFKFYQEPNEETPKSLYHIAAALLNYKLIELEDLYVHLMPVDATIVEEHKREISE
AKQIARKLVTVVLPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGAKGCALQPLKNKRAPQPTESFE
DLRKDTFSMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQTDGRPEVKDKMEILLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSGHPLLVKVKAQTV
ERARYIMKRLTKENIKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTLSLWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYEELKKAEKGNRQQQKV
TKYVAACEQVMTPVHEAVMSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIEENSEIPLNKKKKEKERCTALQEKLQEEEKKQMEHVQRVLHRLKLEKDSWLLT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSNRAVYEKECVNYPGFLTIFRAAGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQPARSATPASQQNGPG
STGKLTANTSKTEEGGFEDGDRVKDKSQGTTKPVNKANSTAAKVTTSNGNGALNSTKAVK
DDKEKSGKEKKEKKEKTPGSTPETKTENRREKQRDERAGKEERLLREGKEKTPKADREKV
KLDEKSGKDDKAKAGNGEPVEPARDAVKESKNKEKGDRNAATATLKSPNPRSDSAESERD
HKRRKLDSHSSPSHSSSVKDSSNELKDPTTKQQINFNSVARSKSREREVEKKDTESVQGR
SKEKKEEKERKERKRDHGVNDREASQESKRRKDENGTNSSKNSQSASPSCDSPLTPEKEK
TKRSKSSSKEKAESVKAERTSSGGKKESRHEKSEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccccggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gaatttgtgcaactctgcaaagagcttacagagaaaactgatcatgggaatgaaactaaa
gacatacaggccgctctttatgaggtctgctcgcaggttgtccagggtaacctgaaaatt
gatctcgtttccgctgtcctcggggaaatgatggaactcagagatgatttgccatcaatt
ttagcagatgtgttctgtatattagatttagaaactggtgcactagaagaaaagaacaag
cgggaccattacactcatttagtgggagcctgtttgtcttttgtaccggaggccatcctg
aaagagcgactcgacccagagaccttggaatctcttggattgataaaacaagctcatcag
tttaatcagaagattgtaaaaatcaagactaagctattttacaaacagcagaagtttaac
ttgctaagggaggagaacgagggctacgccaaactgatcacagagctcggccaagacctg
tctggcaacatcaccagcaacctcgtcctggagagcataaagtccctcattggctgcttc
aatttggaccctaatcgggttttggacatcattttggaggtgtacgagagccggtctgaa
caagatgagttctttctgtccctcatcaagtcctacatgtgtgagccaatcaccctctgc
catatactgggctttaagttcaagttctaccaggaacctaatgaggaaactccgaaatct
ctttaccacattgctgctgctctcctgaactacaagctgatagagctggaggatctctat
gttcatctcatgccagtagatgccaccattgtagaagaacacaaacgggagatttcagag
gccaagcagatcgctcgcaagctggtgacagtcgtgcttccctcggagaaaagtgaagac
aaggagaaggagaaagaaaaggaagaagaaaagaacgagaagccacctgacaaccagaag
ctcggtcttttggaggctctactcaggatcggagactggcaccacgcccagagtatcatg
gaccagatgccgtctttttacgctacttctcacaaggccattgcgctggcgctgtgccaa
cttgtacacctgaccgtggagcctctttacagaagagctggcgttccaaaaggagcaaag
ggctgcgcgttgcaaccgctgaagaacaagcgggctccacagcccaccgagagcttcgag
gatctacggaaagatactttcagcatgctctgctacctgggccctcacctctcccatgac
cccatcctctttgctaagatagtacgattgggcaagtccttcatgaaagagtatcaaact
gacggtagacctgaagtgaaagataagatggagatattgttgagctgcttcctgagcatc
gcagatcaggtgttgctgccctctctctctcttatggagtgcaacgcctgcatgtctgag
gaactatggggcctgtttaagctctttccctaccagcacaggtaccggctttatggacag
tggaagaatgagacgtactccggccatccactgttggttaaagtaaaagcccagactgtg
gaaagggccagatacattatgaagcgcttgaccaaagagaacataaaacagtctggacgg
cagattggcaaactgagccatagcaaccccaccatcctcttcgattacatgttgtctcag
atccagtggtacgacaacctcattgttccggtggtggactcattgaaatacctcacatct
ctcaactatgacgtcctggcctattgcatcatcgaagctctggccaatcccgagaaggag
aagatgaaacatgacgacactaccctctccttgtggcttcagagtttggcgagtctgtgt
ggagccgtgttcagaaaatacccgattgaattggctggccttctgcagtatgttaccaac
cagctgaaggcgggaaaaagttttgacttgctgattctgaaggaggtggttcagaaaatg
gccggcattgagatcacagacgaaatgacttcagaacagttggaggccatgacaggagga
gagcagctgaaagctgagggcggctacttcggccagatcaggaacacaaagaaatcttct
cagcgcctgaaggacgctctgcttgaccacgaactagcgctgccgctgtgtttactcatg
gcccaacaacgaaatggagtcgttttcctggagggaggagagaagcatctaaaactcgtg
gggcatctttatgaccagtgtcacgacacactggtgcagtttggtggctttttagcctcc
aatctcagcacagaggattatataaagcgagttccctccatcgacatcctttgcaaccag
tttcataccccgcatgatgctgctttcttcttgtcgcgccccatgtacgcacatcagatc
ttgtcaaaatacgaggagctgaagaaggctgaaaaaggcaaccggcagcagcagaaggtc
accaagtacgtggcggcatgcgaacaggtgatgacgccggtgcacgaggctgtgatgtcg
ctccatccggccagagtctgggacgatctgcggcctcagttctacgccaccttctggtcg
ctcaccatgtatgacttggccgtgccgcatgctgcgtatgagcgggaggtaaacaagcta
aaggcccagatcaaggccatcgaggagaactctgagatacctttaaataagaagaagaag
gagaaggaacgttgcacagccctgcaagaaaagttacaggaagaagaaaagaaacaaatg
gagcatgtccaaagagttctgcaccgtctcaagctggaaaaagacagctggttgttgacc
aaatccacaaagaatgagaccataacaaagttcctgcagctgtgtctgttccctcgctgc
atcttctcctccatcgacgccgtgtactgcgcccgcttcgtcgagctcgtccaccagcag
aaaactccaaacttctgcactctcctctgctacgacagggtcttctctgccatcatttac
acggtggccagctgcacagagaacgagtctcaccgctacggccgcttcctctgctgcatg
ttggaaacggtgacccggtggcatagcaaccgcgccgtctacgagaaggagtgtgtgaat
tacccaggcttcctgacaatcttccgagccgcagggttcgatggaggaaacaaagcggat
cagctggattacgagaactttcggcatgtggtccacaaatggcactatatgctgactaaa
gcttcagtccactgcctggagacaggagattacacccacatccggaacattctgatcgtt
cttaccaagatcctgccctgctacccaaaggtcctgaacctgggccaagcgctggagtgc
cgggtccacaagatctgccttgaagagaaggataagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttc
caccacaaggaccagccagctcgcagcgccacgccggcgagtcagcagaacggccctgga
agcaccggcaagctcaccgccaacaccagcaagaccgaggaggggggatttgaagacggg
gaccgggtcaaggataaatctcaggggaccacaaaaccagtcaacaaagccaacagcaca
gcagccaaagtgaccaccagcaatggaaacggtgctctcaacagcaccaaagctgtgaag
gacgacaaagagaagagcgggaaagaaaaaaaagaaaagaaagaaaagacgccaggcagc
actccagagacaaaaacagagaaccgcagggagaagcagagagacgaaagagcgggaaag
gaggagcggttgctgcgcgagggtaaggagaagaccccgaaagcagaccgggagaaagtc
aagctggacgaaaagagcggcaaagacgacaaggccaaagccggaaacggggagccagtg
gaaccagccagagacgccgtcaaggaatccaagaacaaggagaaaggagacaggaacgct
gcgactgcaaccctcaagtcaccaaatccgagatccgattcggccgaatctgagagggat
cacaaaagacgaaagctcgacagtcactcgtccccatcccactcctcatctgttaaggac
agtagcaacgaactcaaggatcctacaaccaagcagcaaatcaactttaattcagttgcc
cggtccaagagcagagagagggaagtggagaagaaagacacagagagcgtacaaggccga
tccaaagagaagaaggaggaaaaggagcggaaagagagaaaacgagatcacggcgtcaac
gaccgcgaggccagccaagagtccaagcggaggaaggacgagaacggcaccaactcctcc
aaaaacagccagagcgccagtccttcctgcgactctcctctgacgccggagaaagagaag
accaagaggtccaaatcctccagcaaggagaaggccgagtccgtgaaagccgaacgaacg
tcttccggaggcaagaaggagtccagacatgaaaagtctgagaagaaggagaagagggac
agcgccggagggaaggaggagaaaaagcatcataagtcgtccgacaagcacagataa
DBGET
integrated database retrieval system
