Poeciliopsis prolifica (blackstripe livebearer): 129368612
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Entry
129368612 CDS
T09758
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129368612 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129368612 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129368612 (pcdh1a)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129368612 (pcdh1a)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129368612 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
Cadherin_CELSR2_9th
Ig_Cad99C_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
129368612
NCBI-ProteinID:
XP_054899637
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MELNLRVVLFWVVVLHGGSVDGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATL
FGLQVAEDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
APKFEKTSYDAEVLENSPVGHSVLQVKANDSDMGPNGEIEYTIHQAVDPVPRLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSPTDNKRKY
FLQTTTPLDFERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPEERILDVTATDADSGTNAQLLYDIVADSTIKGLFEIDPNSGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNEPKFMLSGYSFSVLENMPPLSPVGMVTV
QDMDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPKS
SYVGVTINVLDENDNEPVITKPSNSSFRRLSPLASPDSHVEVVEAEDLDSGPNAELVFNI
AGGNPYQLFRISPTTGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETI
SNVSFVEALVGHSLYTPLDRDIAGDPDSGFAAHRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNTKGKRGRKGKPQKSPKPLGEDEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPMRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHR
SRLPPSRSAYSSSGQDPSQDCPVEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaatttacgagtagtattgttttgggtcgtggtgctgcacggtggctccgtc
gatggcagtatcctctacagagtccaggaggagcagccacccaacactctcataggcagt
ctggcagcggaccaggggctgccagattcaggtcacctctacaagcttgaggtgggtgcc
ccttatctccgagttgatgggaagacaggagacattttcactactgagattccaatagac
agagagaccctccgggactgccggtccctggccaagggcaagccgtgctacttggaattt
gaagtatcggtaacagacctgatacaaaaccagagcccacgacttattgaaggacgtatt
gaagtacaggacatcaatgacaacaccccgcaatttccctcttctgtgctcaccatctca
gtacctgagaacacaatcatgggggcattattctccatacctctagccactgacagggac
tctgagaggaatggagtggctgactatgcgctgactgcgggccccgatgcagcaacgcta
tttggtttacaagtggcggaggacaggggagggaaactcccacagctcatcgtcctcggc
aatttggaccgcgagttaaaggattcttacgacctcaccataaaggcggtggatggaggg
aaccctcagcgctacagcagtgctctgctcagagtggttgttaccgatgccaacgataac
gcccctaagtttgaaaagacttcatacgacgcagaagttttagaaaacagtccagtcggg
cactccgtgttacaggtcaaagcaaatgactctgacatgggccctaatggagaaattgaa
tacaccattcaccaagcagttgacccagtaccaagactcctacgaattgatcggtctact
ggcattatctatgtgaagggaccactggacagggaggaaatcagcagcttgtctttctat
gtggtggcaagggataagggtcctcaacctaagagctctaagacgtttgtaacgattgaa
gtgactgatcaaaatgacaatgctcctgctgtggagattcgtggaattggtctggtgact
cacagtgacggagtggccaatatttcagaggacatgccagtggggacagctgttgctttg
gtgcaagtgtctgacaaagatgaaggcgagaacgctgtcgtcacatgcgtggttgcggga
gatgtgccctttcagcttcgtcctgctagcgactctcccactgacaacaaaagaaaatac
tttcttcagacaaccacacctcttgactttgaaagagtcagggactacagagtagaaatt
gtcgcagtggactctggaaacccagcactgtccagtacaaactccctaaaagttcaggta
actgatgtgaacgacaactctccaatattttccccaacactgtttgaagttgactttgct
gaagaaaaccaacccgaggagaggattttggatgtcactgctacagatgctgatagtggc
actaatgcccaactgctgtacgatattgttgcagattcaaccatcaaaggtttgtttgag
attgacccaaactcaggtgaagtaagagctcgaagcccactggatcgtgaacataaagag
cggtatgagtttcgggtcacagctgcagacaaaggttcacctgtccataaaggaacagca
acagttgtggtgaaagttcttgaccgcaatgacaatgaaccaaagttcatgcttagtggg
tacagcttttcagtactggaaaacatgcctcccttaagtcctgtgggtatggtgacagtt
caagatatggacaaaggtgagaatgcccgagttcacctctccgtagaacctgatggaggg
aagtttgtagttcagaatggaacaggtacaattctctcaagcatctcttttgacagagaa
aaagaaagcagctatactttccgactaaaggcagtggatgggggagaaccacccaagtcc
tcctatgttggtgtcactatcaatgtactcgacgaaaatgacaatgagcctgtcatcacc
aaaccctccaattcttccttcaggcgcttatcacctctcgcatctccagacagccatgtt
gaggtggtggaggctgaagacctggacagtggacccaatgcagagttagtcttcaatatt
gctggaggaaatccttaccaattatttcgcatctcccccactactggagagatcactcta
gcaaaggagatgacccgcaaacatggggggctgcatcgtttagtagtacgggtgagtgac
aggggaaagcctccacgtcatgcaactgccctggttcacatctatgtcaatgaaacgatt
tcaaatgtcagcttcgtggaagccttagttggacacagtctttacactccactagacagg
gacattgccggtgatcctgacagtggtttcgctgcccatcgcagtaacattttgtttgga
agcctggccggtgtggcgggagttgtgatgttgatcttggtggtggtgtttattcgccac
cgcatccagagagaaacaaagagtggctatcaagcgggtaaaaaagaaacaaaagaccta
tatgctcccaagcaagcacccaaaaacaccaaaggcaaacgagggcgaaaaggcaagccg
cagaagtccccaaagccacttggggaagatgaggaggtcagcctacaaaagagtctaaag
tttaatcttgatggagtaaacgacagtccccgcatacacctgcccttaacatattccccg
ggaagccccgacatcggtaggcattaccgatccaactctcccttaccttctatccaactg
caagcccaatctccctcagcttctcagaagcaccaggccgtgcaggacctccctgcagcc
aacaccttcgttggaacgggaggagatgacaactccaccggctcagaccagtactcagat
tacagctacaagaccagccaacccaagtacaacaacaaacagcatccccatcgtcgcgtg
accttttccaccaccaaccccgtgcaagacctgcaggacgcctcgcagcacagctactat
gacagcggcttagaggagtcggagacccccagcagcaagtcctcatctggtcctcgcatc
ggacccctgaccctgcccgaggaccactatgagaggaccaccccagatggcagcattgga
gaaacagaacacccagaaaacgacatccgctccctccctgacgtggcgatgaccggaaac
tgcacaaccgaatgcagtgaattgggtcactcggatgcctgctggatgccggggcatccc
tcccccatgcggaagaccaggaacccccccaagctctccacatttgtgccttaccaggag
agagggagtctgggtcgcctggccaacggcagcgccaggctgggtggagaagagcaccgg
tcgcgccttccgccctcccgcagtgcctattccagcagcggccaggaccccagtcaggac
tgtcccgtagaggagatgcccctgagcgtggcctctgagttcccgcccacgtccccttct
gctcacacccccaaacgagagatttacctgtga
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