Poeciliopsis prolifica (blackstripe livebearer): 129368851
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Entry
129368851 CDS
T09758
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129368851 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129368851 (chrne)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129368851 (chrne)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129368851
NCBI-ProteinID:
XP_054899985
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MALRCLGIFFVFLTALGTLTSLVACNEESELIYDLFKSYNKNIRPAVEPKERVQVMIKLT
LTNLISLNEKEETLTTNVWIEIQWSDYRLAWNESNYHGIQVIRVPYNTVWLPDIVLENNI
DGQFDVAYYANVLISSDGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTYSYNEL
DLILATENDEIFEWVHIDPAAFTENGEWAIVHRPARKMINSRYSPDDLEYQEIVFNLVIQ
RKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKVPET
SLSVPLIGKYLIFVMSVTTLIATNQIVVLNYSLRSPSTHIMSHTVKHLFLEMVPRFLGMS
PLVDDSEATAEVNGLKERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVNNI
DVSSTANLYKSLAQAAPEIKQCVDACNFIAESKRQQNDIGSEIESWVLIGKMIDKVCFWA
AIFLFTVGTVGIFLTGHFNRAPDFPFPGENKKYAPVS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcgctgtttagggatatttttcgtctttctaactgctctggggactctaacg
agcctggtggcgtgtaatgaggagtctgagctgatttacgacttgttcaaaagctacaac
aagaacattcgtcctgcagttgaacctaaggaaagagtgcaggttatgatcaagctgacg
ctgacgaaccttatctcactgaatgaaaaggaagagactctaacaaccaatgtttggatt
gaaattcaatggtctgattatcgccttgcctggaatgagagcaattatcacggcattcaa
gttatccgggtcccatacaacacggtttggcttcctgacatagtccttgagaacaacatt
gatggccagtttgacgtggcttactacgcaaatgtcctgatcagcagtgatgggtggatg
tactggttgcctcctgctatctaccgtagcacctgtgcgattgaaattacttacttccca
tttgactaccaaaactgcacactggtattcagatcccaaacttacagttacaatgaactg
gacttgatcttggctactgaaaacgatgaaatatttgaatgggtgcatattgacccagct
gctttcacagagaatggtgagtgggccattgtccaccgacctgccaggaagatgatcaac
tcgaggtattcccccgacgacctggagtatcaggagatcgtgttcaacctggtcattcag
aggaagcccctgttctatatcatcaacatcatcctgccctgctctctcatctcctcgctg
gttgtactggcctacttccttcctgctcaagctggaggacaaaaactgactgtctccatt
tctgtgctgttggctcagactgtcttcctgtttctgattgctcaaaaggtccctgaaaca
tcactctctgtccctctgattggaaagtacctcatttttgtcatgagtgtcacaactctc
attgcaaccaatcagattgtggtgctgaactactctctccgcagccccagcactcacatc
atgtcccacactgtcaagcacctgttcttggaaatggtgcctcgtttcttaggcatgtcc
ccgctggtggacgacagtgaggcaacagcagaggtgaacgggctgaaggagaggcggcgc
agctccttcggcctcatgcagagagcagaggaatatgtgttgaaacaacctcggagtgaa
atgatgtttgacaaacaaagagagaggcatggtctcactcgttcaattgtaaataatata
gatgtcagcagcaccgcaaacttatacaagagtttagcgcaggcggcacctgagattaaa
cagtgtgtggacgcctgcaacttcattgctgagagcaaaagacagcagaatgacattgga
tctgaaattgaaagctgggttctgattggaaagatgatcgacaaggtgtgtttctgggct
gccattttcctcttcactgttggcactgtgggaatcttccttactgggcacttcaaccga
gctccagacttcccatttcctggagagaacaagaaatatgctccagtttcttaa
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