Poeciliopsis prolifica (blackstripe livebearer): 129369027
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Entry
129369027 CDS
T09758
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129369027 (lrfn5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129369027 (lrfn5b)
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129369027 (lrfn5b)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
SALM family
129369027 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129369027 (lrfn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
ig
Ig_2
LRR_9
LRR_14
Sp38
fn3
DHU1_N
LRR_EndoS
C2-set_2
FN3_DSCAM-DSCAML_C
LRR_Zer-1
LRRCT_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
129369027
NCBI-ProteinID:
XP_054900270
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MESFLVYLIILGMAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPYAFRDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHSGAFNDLTALEELDLSYNNLESAPWIAIQRMSNLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPLSFALSF
GGNPLRCNCELLWLRRLQREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELH
ALEGQSVTLRCKARGDPDPIIHWIAPDARLMSNSSRAVVHTDGTLEILISTVKDSGSFTC
VASNPAGEAHQTVDLLIAKLPHITNDTIAEQEPDPGSSDIATVTKTGAEAGGVPLGNAKT
SQEKKVVIAEATSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNILVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCVHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGDADKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRPE
KNDKECVRVALPPPEPTKQRPPVSVPSTKPSVPDCTVSTSAGSHSWHPASPGAPRPKRSS
APPKPSEGRRAEAQTDIELNNTNRNNSSEVKTATAVSTAPPGPGQPQKWTTAPRVPRPHQ
ASRHYMTVPAGAVRVNRRHSLNADSSYSERCYVAYPKVGAGLRSKRSLSMSGELPQLKST
TNIHRARDKLSRSEWLLESTL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcctggtctacctgatcatcctgggcatggctgtgaaggcgcacaaggtc
cagatctgccccaaacgctgcgtctgccagatgctgaaccccaacctggcgacactgtgt
gacaaaaaggggctgctgttcgtgccccccaacatcgacaggcacacggtggagatgcgg
ctcggcgacaacttcgtcaccagcattaagcgcaaagactttgccaacatgaccaagctg
gtggacctgaccctctctcgcaacaccatcgggtccattgcaccgtatgccttcagggac
ctggagaacctccgcgctcttcacctggacagcaaccggctgacccgcatcaccaatgac
accttcagcggcatgtccaagctgcaccacctcattctcaacaacaaccagctcacccac
atccacagtggggccttcaacgacctaacagcgctggaagagctggacttgtcctacaac
aacttggaaagcgccccttggatagccattcagaggatgtccaaccttcataccctcaac
ctggaccacaacatgctcagcctgattccagagggcactttctctgggctgcagaagctt
aagaggctggacgtaacctccaacaagctgcagaaactccctcctgaccccgttttccaa
agagccggggtgctggcgacctccggcataatggggcccttgtcgttcgcgttgagcttc
ggcggcaacccgttgaggtgcaactgtgagctgctgtggctgcggaggctgcagagggag
gatgatctggagacctgtgcttccccgcaacacctagcagggcgttatttctggaccgtt
tcagaggaagagttcctgtgtgagccgcctcttatcaccagacactcgcaggagctgcat
gctttggagggccagagcgtgactctgcgctgcaaagccaggggcgacccggaccccatc
atccactggatcgcgccggacgcacggctcatgtccaactcctccagagccgtggtccac
acggacggcacgctggagatcctcatcagcaccgtcaaggactcaggttccttcacctgt
gtggcctccaacccggccggagaggcccaccagacggtggatctgctcatcgctaaactc
cctcacatcaccaacgacacgatcgctgagcaagagcccgaccccggatcgtcagacatc
gccacagtgaccaagacgggggccgaggcgggaggggtgcctctggggaacgccaagacg
agccaggagaagaaggtggtgatagccgaggccacctccacctcggccctggtgaagttc
aacttccacaggagcatccctggaatccgcatgtttcagatccagtacaacggcacatac
gacgactcgctggtgtacagaatgatccccccaaccagcaagaacattctggtgaacaac
ttggcggctggtacgcagtacgatctgtgcgtcctggccatctacgacgaccaggtcacc
tcgctgaccgccaccagggtgataggctgcgtccacttcaccaccgagccgcagtacctg
cggtgccacttcatgcagtcgcagttcctcggcgggaccatcgtggtcatcattggaggg
attatcgtggcgtccgtgctcgccttcatcatcttcctcattgtgcgttaccgagtgtgt
aaccaaggggatgcagacaaggccctggagatgggggatattcgatcgctgagcagcgat
ggacagctacagggctgtggcatccccaagtccctctctaaacaggttctccgtccagag
aagaacgacaaggaatgcgtcagagtcgccctcccgcctccagagccaaccaagcaacga
cctcccgtgtccgtgcccagcacaaaaccttctgttcctgactgcacggtgtctacctct
gctggcagccatagttggcacccggcttccccaggagcgccgaggcccaagcgttccagc
gctccaccgaaaccctcggagggccggcgggctgaagctcagacggacattgagctcaac
aacacgaaccgcaataactcttcagaggtcaaaacagccactgccgtctccaccgctccc
ccagggcccggtcaaccccagaaatggactactgctccaagagtcccgcgaccccaccaa
gcctcccgacattatatgactgtccctgcaggagcggtgagagtgaaccgcaggcactcg
cttaatgcagactcgtcgtacagcgagcgctgctacgtagcctaccccaaagtcggggcc
ggcctgcgctccaagcgcagcctgtcgatgagcggagagcttccgcagctcaagagcaca
acaaacattcatcgagccagggacaaactatccaggtctgagtggctgctggagagcact
ttatga
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integrated database retrieval system
