Poeciliopsis prolifica (blackstripe livebearer): 129369155
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Entry
129369155 CDS
T09758
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129369155
04082 Neuroactive ligand signaling
129369155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129369155
Ion channels [BR:
pprl04040
]
Ligand-gated channels
GABA-A
129369155
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129369155
NCBI-ProteinID:
XP_054900483
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MHTDVVLFSALLWMVEVSGHKRTRGQSLHPYRHIRLTQEMSPLGLSHKTGSPIFKRSPDI
TKARATKSEQLLRIDDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHY
WKDDRLSFKSNTNQSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVL
YSLRVTVTAMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQ
FLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDR
RAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWISFVFVFLSVIEYAAVNY
LSTLQERKERKLREKLPCTCGLAHPGMMSDCYSEVDVNTTGNYGLPEENGMRRERMLVEL
AMETDQMTGHVGSRAYSSIWIDTHAIDKYSRVIFPGSYILFNIIYWSIYS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggatgtggttctgttcagcgcgctgctctggatggtcgaggtgtccggacac
aagcgcaccagagggcaaagtctgcatccgtacagacacatcagattgacacaagagatg
tctccactgggactcagtcacaagactggcagtccgatattcaagagaagtccagatata
actaaagccagagctacgaagtcagagcagctgctgaggatagatgaccatgacttcaca
atgcgaccagggtttggaggacctgctgtcccagttggagtggatgttcaggttgaaagc
ctggatgcgatttcagaggttgacatggatttcactatgaccttgtatctgaggcactat
tggaaagatgatcgtttgtcatttaaaagcaacaccaaccagagtatgaccttcgatggt
cgcctggtgaagaagatatgggtacctgacatgttttttgtccattctaagaagtcgttc
acacatgacacgaccacagacaacgtcatgctgcgagtgtaccccgatggcaaagtcctt
tacagcctcagagtcacagtcacagccatgtgcagcatggacctgagtcgtttccctctg
gacacacaaacgtgctcgttggaaatcgaaagctatgcctatacggatgatgacctgatg
ctgtactggaaggaaggcaacagatctttaaacacggatgaaagaatttctctgtctcag
ttcctcattcaggagttccatacgaccacaaagctggcattttacagcagtacaggctgg
tacaatcggctgtacatcaacttcaccctccggcggcacatcttcttcttcctgctgcag
acgtactttcctgccacgctgatggtcatgctgtcctgggtgtccttctggatcgaccgc
agggctgttcctgccagagtgccacttggtataactactgtgctaaccatgtcaaccatc
atcactggagtcaacgcctccatgccgagggtgtcttatattaaagctgtggatgtttac
ctgtggatcagcttcgtctttgtcttcctttcggtcatagaatatgccgctgtcaactac
ctgtccaccctccaggaacgcaaggaaagaaaactgcgggagaagttgccgtgtacttgc
ggcttagctcatcctggcatgatgtcggactgctacagtgaagtggacgtcaacaccaca
ggaaattacggcctgccagaggagaatggcatgagaagggaaaggatgctggttgaactg
gccatggagactgaccagatgacgggccatgttggctccagggcttacagcagcatctgg
attgacacacacgccatagacaaatactccagggtcatcttccctggatcttatatcctc
ttcaacatcatctactggtctatctactcttaa
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