Poeciliopsis prolifica (blackstripe livebearer): 129369166
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Entry
129369166 CDS
T09758
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129369166 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
Other domain-containing proteins
Patched domain-containing proteins
129369166 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
129369166
NCBI-ProteinID:
XP_054900504
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLRASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFSIDQSKHKLYSDLHTPGRYGRLILLARS
GGNILELADQVLQVHRQVLELRVTYKGFNYTFAHLCVLSHRDRRCLLDDIVTVFQDIQQA
VLSNSSFHKVPLSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRSI
GPVVQDVIAERWENEFCALVTRLSTAEAPHPTDQLHIQSLTSFSLWRDFHQTGMLSKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYAVTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNISASTKSDFINILKGSFLRSPEYQHFTEDIIFSKN
RNTDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREEIECIEVRENPDHVTNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattctgtggaggatgctgcgg
caagtgatacacagagggctcagggcttccttctactggctcggcttgttcgtcagcagg
caccccgtcttcttcctcaccgttcccgcggtgctcaccatcatcttcggctccacggtg
ctcagccgcttcaagcccgagcgggacctggaggtgctggtcgccccgacacacagcctg
gccaagatcgagcgcagcctcgccaacagcctgttctccatcgaccagtccaagcacaag
ctgtactcggatctgcacacgcccggcagatacggccggctcatcctgctggccaggtcc
ggcggcaacatcctggagctggccgaccaggtcctgcaggttcaccgacaggtgctggag
ctgcgcgtcacctacaagggcttcaactacacgttcgcgcacctgtgcgtgctgagccac
cgggaccggcgctgcctcctggatgacatcgtcaccgtgttccaggacatccagcaggct
gtgctgtccaacagcagcttccacaaggtgccgctcagctaccccaacaccactctaaag
gatggacgtgtgtccttcatcggacaccagctcggcggggtatccttctcacccaacagc
cgggaccagcaggtcaagtttgcccgggccgtccagatcacatactacctccgtagcatc
ggccccgtggtgcaggacgtcatcgcggagcgctgggagaacgagttttgcgctctggtc
accagactgtcaacggccgaggcgccgcacccgaccgaccagctccacatccagtcgctc
acttccttcagcctttggcgggacttccaccagaccggcatgctgtccaaaggggaggtg
ctggtcagtctggttctggtgctcctggctgccaccatctccagctccatgcgggactgc
ctgagggggaagcctttcctcggcctcctgggcgtgctgaccatttgcatcgccaacgtg
acagctgcagggatcttcttcatatcggatgggaagttcaactccacactgctgggaatc
ccgttctttgccatgggtcatggaaccaaaggagtgtttgaacttctggcaggctggagg
agaacaagggaaagccttcccttcaaggagcgggtggccgacgccttcgccgacgtgatg
gtgtgctacaccatgaccagctcgctctacatcatcaccttcggcatgggagccagtcct
ttcaccaacatcgagtcggtgaaaatcttctgccagagcatgtgcgtggccatcctggtc
aactacttctacgttttctctttttacggctcctgcctggtgttcgccggacagctggaa
cagaaccgctaccacagcgttttctgctgtaagatcccctcagtggaatacttggaccgc
cagccgacatggtttaaaactatgatgagcgacggccacgacctgtccacccaccacgac
agtgtgccgtaccaaaatcacttcatccagcacttcctgcgtgagcattataccgagtgg
attaccaacacttatgtcaagccttttgtggtcatcctttatcttatctatgcttctttt
tcattcatgggatgtttacaaattagtgatggatcgaacatagtgaacctgctggccagt
aactcgccaagcgtttcgtacgccgtgacccagcagaagtacttcagtaactacagtcct
gtcattgggttttacatctacgagcccatcgagtactggaactccactgtgcaggagcac
ctgaagactctcagtcatggcttcaacaagatctcttggatggacaactttttccactac
ctccgggtggtgaacatcagcgcgtccaccaagagtgacttcatcaatattctgaagggt
tctttcctgcgcagcccggagtaccagcactttacagaggacatcatcttctcaaaaaac
cgcaacacagacgagtacgatatcatcgcctcgcgtatgtatttggtagcgcggaccacg
gaaaagaagagagaggaggtggtggagctcttggagaagcttcgccccttgatgctgatc
aacagcatcaagttcattgccttcaatcccacgtttgttttcatggaccgctacagttcc
tccgtcatctctcccatcctgacctcaggcttcagcgtgctcaccatcctcatcctcacg
ttcttcctggtcatcaacccgctgggaaacttctggctcattctcacggttacgtccgtg
gagctgggcgtcttgggtttgatgaccctctggaacgtcggcatggacagcatctcaatt
ctgtgccttatttatactctcaacttcgctatggatcactgtgcaccacacctgtacact
tttgtgttggccactgagcacacgaggacgcagtgcatcaagttggcactggaggagcac
ggggcggccatcctgcagaacacgtcctgcttcgtgatcgggatcatgcctctagtgttt
gtgccttccaatttgacctacacgctgttcaagtgctccctgctcacggcgggctgcacc
ttgctgcactgtttcgtcatcctgcccgtcttcctgactttctttccgccgtccaaaaag
aggcacaagaagaaaaagcgggcgaagcggaaagagcgggagagggaacgcgagcgggag
agggaacgggaggagatagagtgcatcgaagtcagggaaaatcctgatcacgtgacaaac
gtttga
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