Poeciliopsis prolifica (blackstripe livebearer): 129369460
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Entry
129369460 CDS
T09758
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129369460
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129369460
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129369460
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129369460
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Protocadherins
129369460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
129369460
NCBI-ProteinID:
XP_054900837
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDLKDYYLLAALLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNKPVFKESQIEVHIPENSPIGTSVVQLQATDADIGANADIHYVFGTQVSPATKR
LFALNTTSGIITVQRPLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDRDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELPVMEN
NKRDLFLTTLTATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQATVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVKAVDSGRPPCSSVAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAITDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNA
TLIYDLIRRTMETPIDRNIGESSETYQNGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASESSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGSYQHPKSPVSSFSSQREWGQKDKLLNGHTLSRTWKNESGRSEHFGDRKQFG
SGEGHFTSSSMADIPLVSLKSCQSASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaagactattacctgttggctgctctgcttgcctgcatatggcttgatcct
tcaatagctcaagaattaatttatcccatcagggaggagttgcaagaaaatgtccttatt
ggaaatataccaaaggacttaaacatttcccatacaaatgctgccactggagcaagtgca
aatctcgtgtaccggctggtctccaaagctggagacaacccactggtccgtgttctgagc
agtactggagagatattcacaacatcaaaccgaattgacagagagaagttgtgccctggt
ccctcatttgaggacagcgagtgctcctttgaaattgaagtggttatcctgcctaatgat
tatttcaggctgattaagataaaaataatcgtcaaagacacaaatgataatgcccccatg
ttcccgtcccctgtgatcaacatctctatcccagagaacactctcattaacagccgcttt
gctattccttctgccactgacccagacactggccccaacagtgtccacaaatacgagctg
atcaatgggcaaagtgccttcggtttagacattgtggagacgcctgagggggagaagtgg
ccccagcttattgtgcagcagaatcttgaccgggaacagaaggatacttatgtgatgaag
attaaagtggaggatggtggcagtccacagaaatccagcactgccattcttcaggtgact
gtaacagatgtcaatgataacaagccagtgttcaaagagagtcagatagaggtgcatata
cccgagaactcccctataggcacatctgtggtgcaactccaggctacggatgcagacatt
ggggcaaatgcagacatacattatgtatttggaactcaagtgtctcctgcgactaaaaga
ctttttgcattaaatacaacatctggcataattacagtacagagacctttggaccgggag
gaaactgctattcacaagctttctgttttagccagtgatggcagctcaagtccagccaga
gctacagttactataaatgtgactgatgttaatgacaatcctcctaatatagacctgaga
tacataatcagtcccattaatgggactgttttcctctcagaaaaggatcccatcaatact
aagatcgctctcatcacagtttcagacagagacactgacataaatggcaaggtcatttgt
tttatagagaaggatgtacctttccacctgaaagctgtgtatgacaaccagtatctgctg
gaaacatctgctctgcttgactacgaggggacaaaggaatacaactttaaaattgtcgct
tcagattctggaaaaccgagtttgaatcagacggccttggtgagagtgaggctggaggat
gagaatgacaacccacctatttttactcagccagtcatcgagctgcccgtcatggaaaac
aacaagcgcgacctgttcctcaccacccttaccgctacagatgaggacagtgggaagaat
gcagagatagtgtatcagttgggaccgaatgcatcattttttgatctggaccgtaaaact
ggggtcctgactgcatctagggtttttgatagggaggatcaggacagattcctcttcacc
gtaacggcaagagataacggaactccccctttgcaaacacaggcaactgttattgtgact
gtgctggatgaaaatgataacaatcctaagttcacacataaccactttcagttctttgtg
tcagagaatctgcctaaatacagcactgtgggggtgataactgtgacagactcagatgca
ggagaaaatgctgctgtctctctttctattctgaatgacaatgagaactttatactagat
ccatactctggggtgataaaatctaatgtgtcttttgacagggagcaacagagctcctat
acttttgatgttaaggctgtggacagtggcaggcctccttgctcctcagtcgcaaaggtg
accatcaatgtcattgatgttaacgacaacacgccaattgtcatctatccaccctctaac
acctctttcaagcttgtccctctgtcctctatcccgggatctgtggtagctgaggtgttt
gctgttgatggtgacacagggatgaatgcggaactgaaatacactattgtgagcgggaat
aacaagggtttattcagaatcgaccctgtcactggaaacattacactggaagaaaagcct
gcaataactgacataggcttacacagattagtggtcaatattagtgacctaggatatccc
aaatcactccacactctggtgcttgtatttttgtatgtcaatgacactgtgggcaacgca
acactcatttatgatctcatccggcgcaccatggagaccccgatagacagaaacattggt
gaaagtagcgaaacgtatcaaaatggtgactatttaaccataatgatagcctttgtcact
ggcgcattggtggtgatcattgtcatctttgtgactgtgctgctgcgctgtcgccatgca
tccagatttaaagccgcacagagaaaaaagcaaggggctgagtggatgtcacccaacaca
gaaaacaagcagaacaaaaagaaaaagcgcaagaaaagaaagtccccaaaaagctctttg
ctcaactttgtcaccatcgaggggaacaaaccagatgatcctgcccatgaaccaattaac
ggaaccatcagtctgcccactgagctggaagaacaagggattggacgctttgattggaat
gccacacctactaccaccttcaaaccaagcagtcccgacttggctcggcactacaagtca
gcctcaccgcagtcggcctttcaccttaaggccgacacacctgtctcagtcaagaaacat
cacgtgatccaggaactcccattggataacacatttgttgggggctgtgacaccctttcc
aagagatcctccacgagctccgaccacttcagtgcctcagagagcagctcccaaggaggg
ttcaaaacgaaggggcccatgcacaccagacagcagggaacattaactcgtgcccgaacc
gaactgaaccccgaatatctggacctccgtcctcgagcagagctgaatcccgagtattgg
accccttgcacccctttatcacagcggcgcgtcacgtttcacctgccggatggctctcag
gagagctgcagtgacagcggtctgggggaccacgagcctgtaggcagtggctctctcctc
acacaacctctccctctggtgcaggcgcaggacgacttctacgaacaggcctccccagat
aagaggactgaagctgatggcaactccgatcctaattctgatggacccttgggaccacga
gggcttgtggaagctacagagatgtgcacacaggagtgcctggtccttggacattcagac
aactgttggatgcctcccacattaggatcataccagcatcctaagtcgcccgtgtctagc
ttcagctctcagcgggagtggggtcagaaggacaaactccttaatggacacactctctcc
agaacctggaaaaacgaaagtggacggtcagagcattttggcgacaggaagcagtttggg
agtggggaaggacacttcaccagcagcagcatggctgatattcctttggtgagtctgaag
tcttgccagtcagcatcctgcccagacagtccaaaggaccagcaactataa
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