Poeciliopsis prolifica (blackstripe livebearer): 129369704
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Entry
129369704 CDS
T09758
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129369704 (trmt13)
Enzymes [BR:
pprl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
129369704 (trmt13)
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129369704 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
129369704
NCBI-ProteinID:
XP_054901253
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MTCFHHQKSSDRPLGAPERLTGANMATPPPSRCSFFVQKKNRFCKMVPGSGRSFCGEHAT
MEEGVSSRITCPLDPKHTVAQQNLEKHLKKCNSREKPRPVYYVENINAGRVDKDQELPEV
SLAERSRAELESLVEKLKAAAEGLQQDMEDRTLSHPVLQGELSDPKNGGSAHKHLKQQAS
LLGHLQELGLLSRGRCFVEFGAGRGKLSHWIHRALQNPEGQGIAMESSQDLQLLLVERCC
TRFKVDGKHQGSADPFERLQVDIQHLDLSKVPVLREKALPLVGVGKHLCGAATDLALRCL
LDTAGPRPDTQPLPKRLRGPEPGSDTGPVLGLAVALCCHHRCEWRHYVGQQFFLQRGLGP
AEFSAFCRMSSWATCGPPANRSGAANRSGAAEDHEEAEQMAGLGRFWSVAEREHLGRLCK
LLIDSGRRDFLRTRGFSSRLIGYADAEVTLENVLLTALSSS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtttccaccaccagaagagctccgatcgacccctcggagcccctgaacgcctc
accggggccaacatggcgacacctccaccgagcagatgcagcttcttcgtccagaagaaa
aaccgcttctgtaaaatggtacccggaagtgggcggagcttctgcggagagcacgcgacc
atggaggagggcgtcagtagcaggatcacgtgtccactggaccccaagcacaccgtggcc
caacagaacctggagaagcacctgaagaaatgcaactctagagagaaaccccgacctgtc
tactatgtggagaacatcaatgcaggacgagttgataaagatcaggagcttccagaggtg
tctctggctgagcgcagcagagcagaactggagtctctggtggagaaactgaaggcagct
gctgaaggtcttcagcaggacatggaggacaggacgctgtcccatcccgtcctccaggga
gaactgtctgacccaaagaatggaggctccgcccacaaacacttgaagcaacaggcctct
ctcctaggtcacctgcaggagctgggtctgctcagcagggggcgctgctttgtggagttc
ggtgccggccggggaaagctgtcccactggatccaccgggccctgcagaaccctgagggt
cagggcatcgccatggaatccagccaggacctccagctgctgctggtggagcgctgctgc
acccgcttcaaggtggacgggaagcaccagggttctgctgacccgtttgagcggctgcag
gtggacattcagcacctggacctgagtaaagttccggtgctgagggagaaagcgctgccg
ttggtgggagtcgggaagcatctctgcggagcggcgacagatctggccctgcgatgccta
ctggacacggccggaccccgaccagacacccagccgcttcccaagcgcctcagagggcca
gagccgggctctgataccggtccggttctgggcctggccgtggcgttatgctgccaccac
cgctgtgagtggcgtcactatgtgggtcagcagttcttcctccagagaggacttggaccc
gctgagttctccgccttctgccgcatgtccagctgggccacctgtggcccgccggccaat
cgcagcggagcggccaatcgcagcggagcggctgaggatcatgaagaagcggagcagatg
gcgggcctgggcaggttctggtcagtggcggagcgggagcatctgggtcggctctgtaag
ctgctgatcgacagcggtaggcgggacttcctgcggaccagaggtttcagcagccgtctg
attggatacgcagacgcagaggtgaccttggagaacgtcctgctgaccgctctgtcctcg
tcctga
DBGET
integrated database retrieval system
