Poeciliopsis prolifica (blackstripe livebearer): 129369804
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Entry
129369804 CDS
T09758
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129369804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129369804
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129369804
Protein recycling
Other Rab GTPase associated proteins
129369804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
FANCI_S1
CID_GANP
Motif
Other DBs
NCBI-GeneID:
129369804
NCBI-ProteinID:
XP_054901417
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSQRRGIHVDQSELLCKKGCGFYGNTAWQGLCSKCWREENQREKQRQIQEDWALAERLQR
EEEEAYASRHQRTQSQPAITPFNKFEERKTKEKSSKVNTVTKFFTPSTKTPPKKDADAQS
TPSSSSSASRQPIPDSDRATQEFIDFLKSVKSGREIFKQCRAFTEGMVYKRDMGADEQSE
CVQDFYQNLSDRLQNQFKGSTEHVERVMDEVEKYMMTRLYTEVFCPETTDDEKKDLAVQK
RIRDLHWVTIEMLCVPVDEEIPEVSDSVVKAITDVIEMDSKQVPKEKLACITRCSKHIFN
AIKVSKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLC
CAVAFIEKLDGQSLNMSSEEFELYMSGQASPNWPPPTTAASSAGGAAQTQVHSSLDLLTG
LGERQERVVEKARQLESDLIDWTDEVEQKVQSALESFPLDAQSTTTNAAGGTATTTAAAA
SSAIDSENVENELLPPPLQPQVFAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagacgtggcatccatgtggaccaatctgagctgctctgcaaaaaaggatgt
gggttttatggcaacacagcctggcagggcctgtgctcaaagtgctggcgagaggaaaat
cagcgagaaaagcagaggcaaattcaagaggactgggctcttgcggaaaggctgcagaga
gaggaagaggaagcttatgcaagcaggcatcagaggacacaatcgcaacctgcaatcact
cccttcaacaagtttgaagaaagaaagacgaaggagaagtccagcaaagtcaacacagtc
acaaagtttttcactccatcaacaaaaacaccacccaaaaaggatgctgacgctcagtcg
actccgagctccagctcctcagccagtcgccagcccattccagacagcgaccgcgcaacg
caagagttcatagattttctgaagtcggtgaagtctggcagggaaatcttcaaacagtgt
cgggctttcactgaaggcatggtgtacaagcgggacatgggagccgacgagcagtcggag
tgtgtgcaagacttctaccagaacctctcagaccggcttcagaaccagttcaaaggttcg
acagagcatgtagagagggtgatggatgaagtggagaagtacatgatgacccgactttac
actgaggttttctgtccggaaaccacagacgacgagaagaaagacttggctgttcagaag
agaatcagagatttgcactgggtcaccatagaaatgctgtgtgtgcctgtggatgaagag
atcccggaggtctcagacagcgtcgtcaaagccattacagatgtaattgaaatggactcg
aagcaggtacccaaagagaagctggcgtgcatcacccgttgcagcaagcacatcttcaac
gccatcaaagtgagcaagaaggaggccgcgtcagccgacgacttcctcccgactctcatc
tacatcgtgctgaaggcaaaccctccgcggctgcagtccaacatccagtacatcacccgc
ttctgcaaccccagccgactcatgaccggagaggacggatactacttcactaatctgtgc
tgtgcagtggccttcatagagaaactggatggtcagtctctgaatatgagctctgaggag
tttgagctctacatgtcgggccaggcgtctccgaactggccgccgcccaccaccgccgcc
tcatccgcaggcggcgcagcccaaacccaggtccacagcagcctggacctgctaaccggg
ctcggcgagaggcaggagcgggtcgtggagaaggctcggcagctggagagcgacctgata
gactggacggatgaagtggagcagaaggtgcaaagcgcgctggagagctttccgctcgac
gcccaaagcaccacgacgaacgcggccggcgggacggcgacaacaacggcggccgcagcg
tcgtcggccatcgactctgaaaatgtagagaacgagctgctgcctccgccgctgcagcct
caggtgtttgctggttga
DBGET
integrated database retrieval system
