Poeciliopsis prolifica (blackstripe livebearer): 129369823
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Entry
129369823 CDS
T09758
Symbol
srsf1a
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
pprl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129369823 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129369823 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129369823 (srsf1a)
Spliceosome [BR:
pprl03041
]
Common components
Common spliceosomal components
SR proteins
129369823 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129369823
NCBI-ProteinID:
XP_054901439
LinkDB
All DBs
Position
Unknown
AA seq
259 aa
AA seq
DB search
MSGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFE
DPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGSRGGYGGIGGAPRGRYGPPSRRSEYRVV
VSGLPQSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE
GETAYIRVKLDGPRSPSYGRSRSRSXVAAEAGATVAAPAAVAAIPEAVAEDLPATRPVTA
ALVPALKPLPPSMTSEEKD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgttgtgcgaggccccgctgggaacaatgactgccgaatttacgtggggaat
ctcccgccggatattcgcaccaaagatgtggaggacgtgttctacaagtacgggacgatc
cgagatatcgacctaaagaaccgcagaggaggtccgccgttcgcctttatcgagttcgaa
gacccgagggacgccgacgatgcggtctacggacgtgatgggtacgactacgacggctac
aggctgcgggtggagttcccacggagcggcagaggctccagaggcgggtacgggggcatc
ggtggagcaccgaggggcagatatggacctccatccaggcgctcagagtaccgggtcgtt
gtgtcaggtcttcctcagagtggcagctggcaggacctgaaggaccacatgcgcgaggcg
ggcgatgtgtgctacgccgacgtttacagggacggaaccggagttgtagagtttgtgcgc
aaagaggacatgacctatgccgtccgaaagctggacaacaccaaattccgctcccacgag
ggagagactgcttacattcgtgtgaaattagacggtccccgcagcccgagttacggacga
tcacgctcccgcagcnncgtggcagcagaagccggagccacagtcgcagcgccagccgca
gtcgcagcaattcccgaggccgtggccgaggatctccccgctactcgccccgtcacagcc
gctctcgttcccgctcttaaacctttgccgccatcaatgacatctgaggagaaggattaa
DBGET
integrated database retrieval system
