Poeciliopsis prolifica (blackstripe livebearer): 129369825
Help
Entry
129369825 CDS
T09758
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129369825 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129369825 (robo1)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
ROBO family
129369825 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
129369825
NCBI-ProteinID:
XP_054901442
LinkDB
All DBs
Position
Unknown
AA seq
1694 aa
AA seq
DB search
MVGRQMLLLLLVVVAEMLTGGCVPADGSGKQKGGRRGKGDRSKTGVAQDGAGEGATAAPA
SETEDDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTVEWYKDG
ERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV
AILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKL
MITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPSSTVVLVDQSVEFKCEA
RGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRVISADVGSYTCVAENMVGKAEASATL
TVHVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRF
SVSQTGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQT
VAVDGTVVLSCVTSGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTC
IASTPSGEASWKAYLEVQEFGSPVQPNRPTDPNLIPSAPSKPEVTDVSRTSITLSWKPNL
NSGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDP
SSISDAVKTQDIPPTSQGVDHRQIQRELADVVIHLHNPTILSSSSVRVQWTVEQQSQYVQ
GYKVMYRPEGQQRSEWAVFEVRTPGEDSAVVTQLRKGVTYEFKVRPFFNEFQGTDSDVKV
GKTLDEAPSAPPRKVTVTESGSNGTAVVVSWQPPPEEEQNGVVQEYKIWCLGNESKYHIN
RTVDGSTLSVVIPSLTPGIRYSVEVAASTSAGPGVKSESTFFQFDSSGRMTETVNQENPL
SQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPT
VAYQRGGEGVSSAGRPGLLNMGDPATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDSNL
ATYSRPADCIANYNSQMDNKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGP
GGQPTPYATTQLIQSAIMGNNMNSDRGTGGSGGGLGGGGEVNEKHCWKPPSIQQKQEMGS
QLQYNILEQNKLNKDRYRGGDSPMPATIPYNQTHDTHTGGSYNSSDRGSSSTSGSQGHKK
GVRTPKLPKQSTMNWADLLPPPPANPAPMRNTEEYSLSMEESCDPDMQCPMPPSHMYLQP
DELEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDSHERRRH
GVSPPPPPRPLSPSHTYGYISSPLALDTDGLDDEDILEEEEEDGDETDAEVAKMHYHHTH
PHMHSHHPQMHARRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAV
SSSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNPQGQEVGGASARKYQINQPGHRPGSPV
STDSNMSMAAIHRRPPKKQKQHPAGHPGSQRREAFNEDLPPPPIPPPAVLKSPTHPSKAA
LEGRGVISPKAGESRDKRGGGYRPQEGSDPRTSSSERKDAQDRQKTAHGGKGNKPESSTA
NKARQNTEDVLPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGARRNPGDLVVNNSV
AFHQAEEELEMLES
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaggcagatgctcctgcttctactggtggtggtggcagagatgctgactgga
ggctgtgtgccagcggacggctcagggaagcagaagggagggcggagggggaaaggtgac
aggagcaagactggagtcgctcaggacggtgccggcgaaggggcaacagcggctcctgcc
tccgaaactgaagacgacaactctttgggctacacaggatctcggctgcgccaagaggac
accccacctaggattgtagagcacccttctgatctgatcgtatccaaaggggagcctgcc
acgctcaactgcaaggcagaggggcggccagctccaacggtggagtggtacaaagatggt
gaacgggtggaaacggacagggacaatccccgctcccaacgcatgctgctgcccagtggc
tcccttttcttcctgcgcatcgtccacggacgacggagcaaaccggacgaaggttcctac
gtgtgcgttgcccgcaactacctgggagaggcagtgagccacaatgcctcgctggaagta
gcaattctacgagacgacttcaggcaaaaccctgcagatgtgattgttgcagctggagag
ccggccgtcctggagtgccagcctccacgcggtcaccctgaacccaccatatcatggaaa
aaagacggagtcaatattgatgacagagatgagaggatcactatacgtggaggcaagctg
atgatcacgaatgcccgcaagagtgatgctgggaagtatgtatgcgtcggcacaaatatg
gtcggagagcgtgaaagtgaaatagctgaactgacggttctggagcgtcccagctttgtg
cgtcgcccgagcagcactgtggtcttagtggaccaaagtgtggaatttaagtgtgaggct
cgtggtgatccagttcccactgtacgctggaggaaagacgacggcgacctccctaaagga
cgatacgagatccgtgaggaccacaccctgaagatccgccgcgtgatctccgctgacgta
ggttcctacacgtgtgtggcagagaacatggtggggaaggcggaggcctcagccacgctc
accgtccacgtgcccccagcgtttgtggtgagaccgaggaatcaggtggttggagttggc
aggacggtgacattccagtgcgaggccactgggaacccacagccggccattttctggcag
agggaaggcagtcagaacctcttgttctcctaccaaccacctcaaccctccagccggttc
tctgtatctcagaccggggatctgaccatcacagacgcagagcgctctgacatgggatac
tacagctgccaggctctgaacatcgctggcagtgtcatcaccaaggccctgcttgaggtt
actgatgttgtgtcagaccgcccgccaccagttatacgacaggggcccaccaatcaaacg
gtggctgtggacggaaccgtggtcctgagctgtgtgacatctggtaaccctacacccacc
atcctgtggaggaaggacggcgttttagtgtccacacatgactccagagtcaaacagctg
gacacgggggcactacaaatacgatacgcaaagcttggtgacaccggtacctacacctgc
atcgcctccactcccagtggagaggcttcatggaaagcctatttggaagttcaagaattt
ggatcccccgtccagccaaacagaccgactgacccaaacctgatccccagcgctccgtca
aaacccgaagtcacagacgtttcccggacctccatcaccttatcctggaaacccaacctc
aattctggagccacacccacttcctacatcatagaggccttcagccatgcatctggcagc
agctggcagaccttggcagagcatgtgaaaactgagtcgtttgtgctaaagggcctgaag
cccagcgcagtctacctcttcctagtgcgagcggccaatgcctacggactcagtgatccc
agttccatctcggacgcagtgaaaacgcaagacatccctcccaccagccagggcgtggac
catcgacagatccaaagagaacttgcagatgtggtcatccaccttcacaaccccaccatc
ctctcgtcgtcctccgtcagggtgcagtggacggtggagcagcagtctcagtacgtccag
ggctacaaggtgatgtacaggccagagggccagcagaggagcgaatgggccgtgtttgag
gtccggacccccggagaggacagcgctgtcgtgacacagctgcggaagggcgtcacgtac
gaattcaaagtccgccccttcttcaacgagttccagggaacagacagcgacgttaaagtt
ggcaagaccctggacgaagcccccagcgcgccccctcgcaaggtaactgtgacggagagc
gggagcaacgggactgctgttgtcgtatcctggcaaccccctccggaagaggagcagaac
ggggtggtgcaggagtacaagatctggtgtttggggaatgagagcaagtatcacatcaac
cggacggttgacgggtcaacgctttccgtggtcatccccagtctgacccctgggatccgc
tacagcgtcgaggtcgcagccagcaccagcgccggtcccggggtcaagagtgaaagcact
ttctttcagtttgattcctctgggcggatgaccgagactgtgaaccaggagaacccgctc
tcccagcagatctctgatgtggtcaagcagcctgcctttatcgcaggaattggagcagca
tgttggatcatcctcatggtcttcagcatctggttataccggcaccgaaagaagaggaac
ggcctctccagcagctatgcaggcatacgcaaagtgccgtccttcacattcacaccaaca
gtggcatatcagaggggtggggaaggcgtcagcagtgctggaaggcccggtttgctaaac
atgggcgacccagccactcagccctggctggccgacacgtggcccaattcctgctccaac
cacaacgactgcagcatcaactgctgcacggcaggcaacggcaacagcgacagcaacctg
gccacatacagcagaccagccgactgtatcgccaattataacagccagatggataacaag
cagaccaacctcatggtgccagagtccggcgtctacggagatgtagacctgtccaacaag
atcaacgaaatgaagaccttcaacagcccgaacctcaaagatggccgctttgtcggtccg
gggggtcagccgacgccttacgccaccacacagctcatccagtctgccatcatgggcaac
aacatgaactcagacagaggaaccggagggagcggaggcggactcgggggtggaggggaa
gtaaatgagaaacactgctggaagcctccgtccatccagcagaagcaggaaatgggctcc
cagcttcagtacaacatcttggagcaaaacaagctgaataaggaccggtacagaggaggc
gacagtccaatgcccgccaccatcccctacaaccagacccatgacactcacaccggaggt
tcctacaacagctcggaccgaggcagcagtagcacctctgggagtcagggtcacaagaag
ggagtacggacccccaaactacccaaacaaagcacaatgaattgggccgacctcctcccg
cctcccccggcaaacccagccccgatgcgaaacacagaggagtattcactctctatggag
gaaagctgtgatcctgacatgcagtgccccatgcctccatctcacatgtacctgcagcct
gatgagctggaggaggaggagatggagcggggtcccactcctcccgtacgtggggcggcc
tcctcccctgctgccgtgtcctacagccaccagtccacggccacgctgaccccctccccc
caggaggagatgcagcccatgctccaggatgcgccggacagccacgaacgaagacgccat
ggtgtaagccctccaccacctccgaggcccctctccccctcgcacacatacggctacatc
agcagtcccctggcattggacactgacggtctggacgacgaggacatactggaggaagag
gaggaggacggggatgaaacagacgcggaagtggccaagatgcattaccaccacacccac
ccccacatgcactctcatcacccccagatgcacgcacggaggttgctactgcgaggcctc
gaacaaacgcccgcgtccagcatgggcgacctggagagctcggtgacgggctccatgatc
aacggatgggggtccgcctccgaggaggataatgtctcctcggggaggtcaagcgcggtc
agttcatcggacggctccttcttcacagacgcggactttgctcaggcggttgccgccgca
gccgagtattcaggactcagggtggcaaagtaccccaatccccaaggccaggaagtggga
ggagcttcagcacgaaaataccaaataaaccagccaggccaccgccctggcagcccggtg
tccacagatagtaatatgagtatggcagctattcacagaaggcctccgaaaaagcaaaaa
cagcatcctgcaggacatccaggcagccagcgacgtgaggcctttaacgaagacctccct
cctccacccattcctcctccagcggtgctcaagtctcccacacatccctctaaggcggct
ctggagggccgaggagtgatttcccccaaagcaggcgagagccgggacaagcggggaggg
ggctaccggcctcaggagggctcggaccccagaaccagctcatctgaacggaaagatgct
caggacagacagaagactgctcacggagggaaggggaacaaacccgagagcagcactgcc
aacaaggcccggcagaacacagaggacgttctgccgtacagccgaccacagttcccaacg
gtcaacagccccagagacccaagctcctccagctccatgtcctccaggggttcagggggc
cggcggagaggggaaggagcacgcaggaaccctggagacctggtggtcaacaactctgtc
gcctttcaccaagcagaggaggagctagagatgctagaaagctga
DBGET
integrated database retrieval system
