KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129369890
Entry
129369890         CDS       T09758                                 
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
  KO
K16354  leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pprl04515]
    129369890 (lrfn1)
   04990 Domain-containing proteins not elsewhere classified [BR:pprl04990]
    129369890 (lrfn1)
Cell adhesion molecules [BR:pprl04515]
 Immunoglobulin superfamily
  SALM family
   129369890 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:pprl04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   129369890 (lrfn1)
SSDB
Motif
Pfam: LRR_8 Ig_3 I-set LRR_4 LRR_5 Ig_2 ig fn3 LRR_9 Ig_DSCAM-DSCAML_C C2-set_3 Protocadherin Sp38 DUF4834
Other DBs
NCBI-GeneID: 129369890
NCBI-ProteinID: XP_054901526
LinkDB
Position
Unknown
AA seq 756 aa
MDRLVLCVLLCAALVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRKKDFLNMTSLVHLTLSRNTISQIVPHAFLGLRSLRALHMDGNRLSIIKSDHFK
GLINLRHLILGNNQIHQVASTSFDEFVATIEDLDLSNNNLRSLPWEAIARMTNINTLTLD
HNLIDHIEAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKNYSSKPYV
MEGQGVTLKCKAMGDPDPDIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGSFNCV
ASNAAGIATAAVEISMIPLPLFVNNTGHMREDPGLSDITTSSKAGNDTKGYDKQDKRVLV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTANEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYGSPVDTKAKASSAMHSQTNGSQQRLQRSASKQPSDEGEAPAPKECLAL
VLRVDSEKKEDLASATAVLEVEPLPNADKMMKRRSSLDAQRSGPPSEDTQTDSSLTGSTM
SLCLIGSNAGTKEAPRLKDKKSTLASVGLLPNELARTRHRFSFDGGDYSIFQSHSYPRRA
RTRWHKSTNQLNTESSPLANRRVTFSSTEWMLESTV
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggaccggctggttctttgcgtgctgctgtgcgcagctctggtgaaaggctacagctgc
cccggccgctgcatctgccagcatctctcgcccactctgactctgctctgtgcaaagacc
ggcttgctgtttgtgccccccacaatcgaccggaagaccgtggagctgcggctcaccgac
aacttcatcaccattatccgtaagaaggacttcctcaacatgaccagcctggtccacctc
accttatcccgcaacaccatcagccagatcgtgccgcacgccttcctgggcctgcgctcg
ctccgggcgctccacatggatgggaaccggctcagcatcataaagagcgaccacttcaaa
ggcctcatcaacttgcggcacctcatcctcgggaacaaccagatccaccaagtggcctcg
acctccttcgacgagtttgtcgccaccattgaggacttggatctgtccaacaacaatctg
cgcagccttccttgggaggccatagccagaatgactaacattaacacgctcaccttggac
cataacctcatcgaccacatagaagcagggactttcactttgctcactaagctcgtccgc
ttggacatgacttccaaccggctgcagaagcttccaccagacagcctgttccagcacgcc
caggttctatccgacgccaagggctccagctcatccacactggcagtgagcttcggcggg
aatcccctccactgcaactgtgagctgctgtggctgcgccggctgacgcgggaggacgac
ttggagacctgcgcctcgccggaacacctcatggacaaatatttctggtcgatacaggag
gaggagttcatctgcgagcccccgctgatcaccaagaactactcctctaagccctatgtg
atggagggccagggtgtgactttaaagtgcaaagccatgggggatccagatccagacatt
cactggaggtcaccagacggcaagctggtgcacaacaactcacgcaccatcttgtatgac
aacggcacccttgacattctcatcaccacgctgaaggacagtgggtcgttcaactgcgtg
gcgtccaatgctgccggcatcgccacggctgctgtggagatcagcatgatccccctgccc
ttgttcgtgaacaacaccggccacatgcgcgaggaccccggcctctccgacatcaccact
tcctccaaagctggcaatgacacaaaaggctacgacaagcaggacaagagggtcctggtc
acggagctgacctcgtcctccgccgtgatccgctggccgtctgaacgccacatccctggg
atcaggatgtaccagattcagtacaacagcactgcagatgatacgttggtgtacagaatg
atcccgtctaccagcaaaaacttcctcatcaacgacctggctgcggggcgggagtacgac
ctctgcgtgctggccgtgtacgacgacggcatcacgtcgctgacggccacgcgcgtggtc
ggctgcgtgcagttccacacggccaacgaggtcagccagtgccgcttcatgcacagccag
ttcctgggaggcaccatgatcatcattattggcggcatcatcgtcgcttccgtgctggtg
ttcatcatcatcctgatgatccgctataaggcctacggcagccccgtggacaccaaggcc
aaggccagctccgccatgcactcgcaaaccaacggcagccagcagcggctgcagcgctct
gcgtccaagcagccgtctgacgaaggcgaagcgccggcgcccaaagagtgcctggctctg
gtgttgagggtggacagcgagaagaaggaggacctggcgtccgcgacggcagtcctggaa
gtggagccgctcccaaatgcggacaagatgatgaagagaaggagcagtctggatgctcag
cgctccgggccgccatctgaggacacacagacggacagcagcctgaccggctccaccatg
tccctctgcctcatcggctccaatgccggcactaaggaggctcccaggcttaaggacaag
aaaagcaccctggccagcgtggggctactccccaacgagctggcacgaactaggcataga
ttctctttcgatggtggggattactccatatttcagagtcacagttacccgcgcagagcg
aggacgaggtggcacaagtccaccaaccagctcaacacggagtcatcgccgctcgccaac
aggagagtcacattcagcagcactgagtggatgcttgagagcacggtttga

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