Poeciliopsis prolifica (blackstripe livebearer): 129369890
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Entry
129369890 CDS
T09758
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129369890 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129369890 (lrfn1)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
SALM family
129369890 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129369890 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
Ig_2
ig
fn3
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Protocadherin
Sp38
DUF4834
Motif
Other DBs
NCBI-GeneID:
129369890
NCBI-ProteinID:
XP_054901526
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MDRLVLCVLLCAALVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRKKDFLNMTSLVHLTLSRNTISQIVPHAFLGLRSLRALHMDGNRLSIIKSDHFK
GLINLRHLILGNNQIHQVASTSFDEFVATIEDLDLSNNNLRSLPWEAIARMTNINTLTLD
HNLIDHIEAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKNYSSKPYV
MEGQGVTLKCKAMGDPDPDIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGSFNCV
ASNAAGIATAAVEISMIPLPLFVNNTGHMREDPGLSDITTSSKAGNDTKGYDKQDKRVLV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTANEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYGSPVDTKAKASSAMHSQTNGSQQRLQRSASKQPSDEGEAPAPKECLAL
VLRVDSEKKEDLASATAVLEVEPLPNADKMMKRRSSLDAQRSGPPSEDTQTDSSLTGSTM
SLCLIGSNAGTKEAPRLKDKKSTLASVGLLPNELARTRHRFSFDGGDYSIFQSHSYPRRA
RTRWHKSTNQLNTESSPLANRRVTFSSTEWMLESTV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctttgcgtgctgctgtgcgcagctctggtgaaaggctacagctgc
cccggccgctgcatctgccagcatctctcgcccactctgactctgctctgtgcaaagacc
ggcttgctgtttgtgccccccacaatcgaccggaagaccgtggagctgcggctcaccgac
aacttcatcaccattatccgtaagaaggacttcctcaacatgaccagcctggtccacctc
accttatcccgcaacaccatcagccagatcgtgccgcacgccttcctgggcctgcgctcg
ctccgggcgctccacatggatgggaaccggctcagcatcataaagagcgaccacttcaaa
ggcctcatcaacttgcggcacctcatcctcgggaacaaccagatccaccaagtggcctcg
acctccttcgacgagtttgtcgccaccattgaggacttggatctgtccaacaacaatctg
cgcagccttccttgggaggccatagccagaatgactaacattaacacgctcaccttggac
cataacctcatcgaccacatagaagcagggactttcactttgctcactaagctcgtccgc
ttggacatgacttccaaccggctgcagaagcttccaccagacagcctgttccagcacgcc
caggttctatccgacgccaagggctccagctcatccacactggcagtgagcttcggcggg
aatcccctccactgcaactgtgagctgctgtggctgcgccggctgacgcgggaggacgac
ttggagacctgcgcctcgccggaacacctcatggacaaatatttctggtcgatacaggag
gaggagttcatctgcgagcccccgctgatcaccaagaactactcctctaagccctatgtg
atggagggccagggtgtgactttaaagtgcaaagccatgggggatccagatccagacatt
cactggaggtcaccagacggcaagctggtgcacaacaactcacgcaccatcttgtatgac
aacggcacccttgacattctcatcaccacgctgaaggacagtgggtcgttcaactgcgtg
gcgtccaatgctgccggcatcgccacggctgctgtggagatcagcatgatccccctgccc
ttgttcgtgaacaacaccggccacatgcgcgaggaccccggcctctccgacatcaccact
tcctccaaagctggcaatgacacaaaaggctacgacaagcaggacaagagggtcctggtc
acggagctgacctcgtcctccgccgtgatccgctggccgtctgaacgccacatccctggg
atcaggatgtaccagattcagtacaacagcactgcagatgatacgttggtgtacagaatg
atcccgtctaccagcaaaaacttcctcatcaacgacctggctgcggggcgggagtacgac
ctctgcgtgctggccgtgtacgacgacggcatcacgtcgctgacggccacgcgcgtggtc
ggctgcgtgcagttccacacggccaacgaggtcagccagtgccgcttcatgcacagccag
ttcctgggaggcaccatgatcatcattattggcggcatcatcgtcgcttccgtgctggtg
ttcatcatcatcctgatgatccgctataaggcctacggcagccccgtggacaccaaggcc
aaggccagctccgccatgcactcgcaaaccaacggcagccagcagcggctgcagcgctct
gcgtccaagcagccgtctgacgaaggcgaagcgccggcgcccaaagagtgcctggctctg
gtgttgagggtggacagcgagaagaaggaggacctggcgtccgcgacggcagtcctggaa
gtggagccgctcccaaatgcggacaagatgatgaagagaaggagcagtctggatgctcag
cgctccgggccgccatctgaggacacacagacggacagcagcctgaccggctccaccatg
tccctctgcctcatcggctccaatgccggcactaaggaggctcccaggcttaaggacaag
aaaagcaccctggccagcgtggggctactccccaacgagctggcacgaactaggcataga
ttctctttcgatggtggggattactccatatttcagagtcacagttacccgcgcagagcg
aggacgaggtggcacaagtccaccaaccagctcaacacggagtcatcgccgctcgccaac
aggagagtcacattcagcagcactgagtggatgcttgagagcacggtttga
DBGET
integrated database retrieval system