Poeciliopsis prolifica (blackstripe livebearer): 129369978
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Entry
129369978 CDS
T09758
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03440
Homologous recombination
pprl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129369978 (brip1)
03460 Fanconi anemia pathway
129369978 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129369978 (brip1)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129369978 (brip1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129369978 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
129369978 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
129369978
NCBI-ProteinID:
XP_054901671
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MASPVEYTIGGVKVHFPCKAYPSQLAMMNSIMRGLNYGQHCLLESPTGSGKSLALLCSAL
GWQQAQMAKVKEGGGHAGEKCQSDKHVGDGKKSEPPSPCSCVCHREAAQPAVVDLTESPC
KETAQPSYTASEHVPLPGESQAKSQSLASRLSEKVQASLDPDCDKDEDFRRDKKRIRTAE
YKSHKRQRTQQGVIFIDDEPELESETSGPHSWKTASTHQAAGLSSSCSPSEPCSHCPCSS
VKDNLKNKDKDKDGSKKIPKIFFGTRTHKQITQIAHELKRTVYSGVHMTILSSRDHTCVN
PDVAPHFNRNERCKDLLEAKDGRSCRFYHGVQKMRDQHTLQWVHGLREAWDIEDLVSLGK
RLRSCSYYAARELMQDASIIFCPYNYLLDPMIRESMEIDLEGQILVLDEAHNIEDCARES
ASYTLELSSLQTTKDELDGMVNSNIRRSKHESLRNFCYALINWIQESQVLLSERGFEGAC
KVWSGKEMLTVFHSLGVTFDTFCKMKQNLASVLEKEERVGLVNGKEDMVQVPIISASTAT
VLKNLFMVLDFLYRDSCRFAEDYRIALQRSYAWTNQVPPDVPDARGFLVLPRYRQRQSAR
VKTEVLTLSFWCLNPAVAFSDLSGSVRSIVVTSGTLSPMGSFSSELGVKFSIQLEANHVI
NKSQVWVGTVGAGPRGRKLCATFQHAETFAFQDEVGDLLLHVCRVMVKGVLCFLPSYKML
DKLKDRWVNTGLWEKLEQEKTVITEPRGGGKGDFDELLQMYYDAIKTCEGRDGALLIAVC
RGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHYKSRGLLPGHRWYEIQA
YRALNQALGRCIRHRNDWGALILVDDRYKNNPNKYIAGLSKWVRQLVQHHNTFSNAMQSL
EAFSEVQQNVEVAPGNRLTLNVSDLSNSSPLSVSGQSFNGEPEPQRANSCDKPPYSQQNI
ITQLKTEHNNTAEPLNALQNAPAMQLSAQHLYHIFTINPTNTNLKTPIFKAKPANCSVQP
GALQISSPPVNPETLRTNQTDGNCLSENTEALGVSTITTPPGFKSESPVPAKSSDDEEDK
TIFYTPELFEDEENLPKENHVSSPRVDPGTERSATPSQESATAFGEQSVVSVTHTAELSQ
SQKEDKEALQQSEKTEEDESQSRQRGSRLHRLSRSRQRVSLSQTAVKVRRSYRQKHRRFR
KASKVSKSNTEQKTCSLGLYCSLCGKELLSDAHVQHDVCNKNHLAVLRELRCNAGAYTCR
HQSVPPSPGSDSWMLMVQSPSSLKALRRTLEPYCDQSLTSYNAIWDPEERSVTRFLQCKG
CSTQRSKTSAPLMAAEIHYPGNDAGDQMWLAPAAVHLCALVSGKTETEDFSSQH
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgtggagtacaccattggcggagtgaaggtccacttcccctgcaaggcg
tatccatcccagctagccatgatgaattctattatgcgagggttgaactatggacagcac
tgtttgttggagagtcccacaggcagcggtaaaagtctggccttgctgtgctctgctctg
ggctggcaacaagctcagatggctaaggtgaaagaaggaggaggtcatgctggagaaaaa
tgccagtcagataaacatgtgggcgacggcaagaagtcagaacctcccagcccgtgttcc
tgtgtgtgccacagagaagcagcccagcctgctgtggtggacctcactgagtcaccctgc
aaagagacggcccagccatcgtacacagcatcagaacacgtgccactaccaggtgagtct
caagctaaaagccagtctttagcgtcccgtctgtcggagaaagtccaggcctctctcgac
cccgactgcgataaagatgaggacttcagacgagacaagaagcgcatccgtactgcagag
tacaagagccataaaaggcagcgcacacaacaaggtgtcatattcattgatgatgaacct
gaattggaaagtgaaacatctggtcctcacagctggaaaactgcttcaacccaccaggca
gccggtttgtcctcatcatgcagtccctccgaaccctgctcccactgcccgtgttcatca
gtcaaagacaacttgaagaacaaggacaaagacaaagatggcagcaagaagattccaaag
attttttttggcacacgaacccataagcagataactcagattgctcatgagctgaagcgc
actgtttattctggagtgcacatgacaatcctttctagcagagatcacacctgtgtcaac
ccagacgtggcgccgcatttcaaccgcaacgaacgctgcaaggatctgctggaggccaaa
gatggaaggtcatgcaggttctaccatggtgtgcagaagatgcgggatcagcacaccctg
cagtgggtccatgggctgcgtgaagcctgggacatcgaagacctggtgtctctggggaaa
aggcttcgatcctgctcttactatgctgctcgggaacttatgcaggatgcctctatcatc
ttttgtccgtataactacttgctggatccaatgatcagagagagtatggagattgacctg
gaggggcagatcttggtgctggatgaggcccataacatagaagactgtgcaagggaaagc
gccagctacaccttagagcttagcagcctgcagacgaccaaagatgaactggatggcatg
gtcaacagtaatattagacgctccaagcacgagtctctcaggaacttctgctacgccctg
atcaactggattcaagagagccaggtgctgctgtctgaacgagggtttgagggtgcctgc
aaagtctggagtggaaaggaaatgctgaccgttttccacagcttgggtgtcacatttgac
accttctgtaaaatgaagcaaaacctggcatctgtgttggagaaggaggaacgtgtcggt
ttggttaacggcaaagaggacatggtgcaggtcccaatcatcagcgcatctacagctact
gtcctgaaaaacctctttatggtgttggattttctctacagggacagctgccggtttgct
gaggactaccgcattgcattgcagaggagctacgcatggaccaatcaggtcccgcctgac
gttcctgatgctcggggctttttggtcctgcctcgctaccgacagcgtcaaagtgcgcgg
gtcaaaacggaagttctcacgctgagtttctggtgtctcaaccctgctgtggctttctct
gacctgagtggttcagtgcgaagtatcgtggtgacctcaggaacactgtcccctatgggc
tccttctcctctgaacttggggtaaaattcagcatccagttagaagccaaccatgtgatc
aacaaatcccaggtgtgggtgggcactgttggtgcaggaccccgaggccgaaaactctgc
gccacctttcagcacgctgaaacatttgccttccaggatgaggtgggagatttgctgctt
catgtctgccgggtcatggtcaaaggcgtgctctgctttctgccttcctacaagatgctg
gacaagctgaaggaccgttgggtcaacactggtctgtgggagaagctggaacaagagaaa
accgtcatcacagagccccgcggtggtgggaagggggactttgacgagctactacagatg
tattacgatgccataaaaacgtgtgaaggtagagatggtgcactacttattgctgtatgc
aggggtaaggtcagtgaaggcctagatttcacagacgacaatgccagagcagtagtgacc
attggaatcccttttccaaacatcaaagacctccaggtggaactcaagatgaaatacaat
gaccagcactacaagtcgagaggtctccttccaggccatcgctggtatgagatccaggcc
tacagagctctaaaccaggcgctggggagatgcatccggcacagaaatgactggggtgcc
ctgattctggtggatgatcgatacaagaacaatcctaataaatacattgcaggtttgtct
aaatgggtccgccagctggtccagcatcacaacaccttcagcaatgctatgcaatctctg
gaagctttctctgaagtgcagcagaatgtggaggtggcccccgggaaccgtctgacgctc
aacgtttctgatttgtctaacagtagtcccttgtctgtgtcgggtcagagttttaatgga
gaaccagaacctcagagagccaattcatgtgacaaacccccttattcccagcagaacata
atcacacagctgaaaactgaacacaataacacagccgagccactgaatgcactgcaaaat
gctccagctatgcaactctcagcccagcatttgtatcacattttcaccatcaaccctaca
aacaccaaccttaagacgcccatctttaaagcgaaaccagcaaactgctccgtccagcct
ggggccctgcagatctcttctccaccagtgaatccggaaacattgcgcactaaccaaacg
gatggaaactgtctgagtgaaaacactgaggctctgggggtgtccacaataaccacccct
cccggctttaaaagtgaatcaccagtaccagcaaagtcttctgatgatgaggaggacaag
actattttctatactcctgaactttttgaggatgaagaaaacctgccgaaagagaaccat
gtgtcctctcccagagttgatcctggcacagagagatcagccactccatctcaggagtca
gccactgcttttggtgaacagagtgttgtttcagtcacacacactgcagagctatcacag
agccagaaagaggacaaagaggcactgcagcaaagtgagaaaacagaggaggatgagagc
cagagcagacagagaggaagtagacttcacaggctgtccaggtccagacagagagtttcc
ctcagtcagacagctgtaaaagtacgaagatcttatagacaaaaacacagaagatttaga
aaagcctctaaagtgtcaaagagcaacacagagcagaaaacgtgttctttgggactttac
tgttctctctgtggaaaagaactactttctgatgcacatgtccagcatgatgtgtgtaat
aaaaaccatctagctgttctaagagaactcagatgtaatgctggggcctacacctgccgc
catcagagtgtacctccatcaccaggctcagacagctggatgctgatggttcaaagcccc
tcgtctctaaaggccttgaggaggactctggagccctactgtgatcagagtttaacttca
tacaatgccatctgggaccctgaggagcgttctgtcaccagatttttgcagtgcaaaggc
tgctccactcagagatccaagacttctgcacctttaatggctgctgagatccactaccct
ggaaatgatgctggagatcagatgtggctggcccctgctgcagtccacctctgcgctttg
gtttctggaaaaactgaaacggaagatttttcttcgcagcattga
DBGET
integrated database retrieval system
