Poeciliopsis prolifica (blackstripe livebearer): 129369979
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Entry
129369979 CDS
T09758
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04020
Calcium signaling pathway
pprl04144
Endocytosis
pprl04510
Focal adhesion
pprl04540
Gap junction
pprl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129369979 (pdgfra)
04020 Calcium signaling pathway
129369979 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129369979 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
129369979 (pdgfra)
04540 Gap junction
129369979 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129369979 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprl01001
]
129369979 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprl04090
]
129369979 (pdgfra)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129369979 (pdgfra)
Protein kinases [BR:
pprl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129369979 (pdgfra)
CD molecules [BR:
pprl04090
]
Proteins
129369979 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
129369979
NCBI-ProteinID:
XP_054901675
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MDSVRMYLICGVAIVLMLSVTPGLSAPTIWPAGDELVLEPHSIINISCTGQSEVVWEEPL
ADDAVVTSNGFTSALLVYNVTVEHTGYYGCRHKDKEGDQNDLVEIYVLVKDPQVLFVPER
AEDLLIPYEDDLIIPCRATAQTHDVELIRVPSGEKLHRYYDYRLGFMGISAPGQYRCEAT
VNGQTFQSDIYTVMRSGSTEVSDFKVEVKASAETVRVGEPFNVSCIGPFGPAFHQQWIHL
KTQAVNAIQTTERLPDWVIYTLSVPRAAAQDGGSYECSVRHEASGKTRVSSVAVSVFEGN
SFVTLDHRGIMQMESVGILAETQYTVYINAYPAPKVSWMKDGQALSENYYISSKTSHMEG
NRYQSIVTFRQPMGKDSGNYTITAISGSRTAQFSFILQVTGSGRLNIRPSFPPILLPDED
EIVVPLHEPFTLTCRGGAKLMWETPYDMLEQSQEDDSGLFVTTIAVEEATAMHTGYYVCL
YNDHNAEETKTSSIYVYVSDPDSLFVPNFINHVPADQNEIEIPCRVSDPRAIVTLVNVDT
NQTVPSDYDSKKGALGIFPTGTYVCKGLINGEEHTSEQYIVHDSIDVLHVELSAKRTALL
VGDTIIVNCLAKGPYLLEDNWKYPGKPANRGTKTVWENKNEGQILYTLTIPQASTKDSGI
YSCSITTVASRDTETKEIAIQVFAGEFLSIKPEFRDHESAELDDVREFIATISSFPDAHV
TWLKDGVPLSDLTAEISTSLKQTSETSYRSILTLIRVREEDSGNYTLRVENGNQSHEVSL
NLVVKVPAVIVDLMDIHHGSTTGQSAVCITRGQPTPVVEWFICKNIKQCANDSSFWAPLP
TNSTEITTESHFDEESNLESQVMFGHLKSTLAVRCLAKNGIGADSREIKLVSNGPHPELT
VAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRW
EFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELK
IMTHLGPHLNIVNLLGACTKSGPIYIITEYCFHGDLVNYLHKNRESFLSLSPEKNKKELD
IFGINPADENSRSYVILSFECKGDYMDMKQADNTQYVPMLEMSTTKYLTQDRDNTPPHAG
DEHASYSLQGSNYDHPPSQKDSGESDNLLSDDTSEGLTTTDLLSFTYQVAKGMEFLASKN
CVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYT
SLSDVWSYGILLWEIFTLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPQDVYEMMIRCW
NTEPEKRPSFMGLSENVASLLPSSYKRHYEKVNHDFLKSDHPAVTRVCIETDADYVDIPY
KNQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPISDDDYGKRNRHSSQTSEESAIETGSS
SSTYAKREGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgtgaggatgtacctgatctgtggtgttgccattgtgttgatgctctcagtt
acacctggactgtccgccccgaccatatggccggcaggagacgagctggtgctggagccc
cactccatcatcaacatcagctgcacgggccaatctgaagtagtctgggaagaacctctg
gcggacgacgccgtcgtcacttcgaacggcttcacctccgctctcctcgtttacaacgtg
acggtcgagcacaccggctattacgggtgcaggcataaagacaaggagggcgaccaaaac
gacctggtggaaatctacgtccttgtcaaagaccctcaggtcctgtttgtcccagagaga
gcagaagacctgctcatcccctatgaggatgatttgatcatcccatgccgagcgacggca
cagacccacgatgtggaactgatccgagtccccagcggagagaagctccacaggtactac
gactacaggctgggcttcatggggatctccgctcctggccagtacaggtgtgaggccaca
gttaacggccagactttccaaagcgacatctacaccgtaatgagatcgggatccacggag
gtgagcgactttaaggtggaagttaaagccagcgcagagacggtgcgagtcggggagccc
tttaacgtctcctgtatcggaccctttggcccagccttccaccagcagtggatccatctg
aaaacacaggctgtaaatgcgattcagacgacggaaagacttcccgactgggtcatctac
actctgagcgtcccgcgagccgccgctcaggacggcggcagctacgaatgctcggtcagg
catgaagccagtggaaaaaccagggtgagcagcgtggctgtgtctgtgttcgagggaaac
tcctttgtcaccctggaccacagagggattatgcagatggagtctgttggcattctggca
gagactcagtacaccgtctacatcaatgcatacccggctccgaaagtgtcatggatgaaa
gacggccaagcgctgtcggagaactactacatttcttccaaaacaagccacatggaagga
aatcggtatcagagcatcgttacgttccggcagccaatggggaaagacagcggaaattac
acaatcacagccataagcggctctcgcaccgctcagttctcattcatcctccaagtgaca
ggttccggcagacttaacatcagaccatccttcccccctattctgctgccggacgaggat
gagattgtcgtccctctccacgagccgttcacgctgacgtgtcgcggcggtgcgaagctg
atgtgggaaacaccgtacgacatgctggagcaatcgcaggaggatgacagtggccttttt
gtcaccaccatcgctgttgaggaagccacagcgatgcacacaggttattacgtttgcctc
tacaacgaccacaatgcagaggaaaccaagaccagcagtatttacgtctatgtatcagat
ccagactctctgttcgtgccaaatttcattaaccacgtgccggctgaccaaaatgagatc
gagattccctgcagggtgtctgatcctagagctattgtgacactggtgaatgttgacacc
aaccaaaccgtacctagtgattatgacagtaaaaagggtgctttgggaatatttcctact
ggaacttatgtctgcaagggtctgatcaatggagaggagcacaccagtgagcaatacatc
gtccatgattccatagatgtcttgcacgtcgagctgtctgccaaaagaactgctttgctg
gttggagacacaataattgtcaactgtttggctaaaggaccttatttactggaagacaac
tggaaataccctggcaaaccggctaatcggggtaccaaaactgtatgggaaaataagaac
gaaggccagatcctgtacaccttgacaatcccacaagcctcaaccaaagacagcggcatc
tactcctgttccattaccactgtggcatctagagacacagagacaaaggaaatagcaatt
caagtgtttgccggtgagtttttgtcaatcaagccggagtttcgggaccatgaatctgct
gagctggatgacgtccgggagttcattgccacaatttcctcctttcctgatgcccatgtt
acttggctcaaggacggtgtcccgctcagcgacctgaccgctgagatctccaccagtttg
aagcagaccagtgagaccagctacagaagcattctcaccctgatccgggtcagggaggag
gacagtgggaactacaccctgcgggtggagaacggaaaccagagccatgaagtcagctta
aacctggtggttaaagtgcctgcagtcattgtggacctcatggacatccaccatggttcc
accacaggacagtctgcagtctgcattaccagggggcaacctactcctgttgtggagtgg
ttcatatgcaagaacatcaaacaatgcgccaatgactcgtctttttgggcgcctctaccc
accaactccacagagatcacgacggagtcccacttcgatgaggagagcaacctggagagc
caggtcatgtttggccatctgaaaagcactctggctgtgcgatgccttgccaagaatgga
ataggagctgacagcagggagatcaaattggtgtccaatggccctcaccctgagctgacg
gtagctgctgctgtgctggtcctcctggtcattgtcatcatctcactcattgtcttggtt
gttatctggaagcagaagccacggtacgagatccgctggagggtcatagagtctgtgagt
ccagacggtcacgagtacatctatgtggatccaatgcagcttccctatgactccagatgg
gagtttcctcgagatagacttgtgcttggccggatcctgggctctggagccttcgggaag
gtggttgagggcactgcctacggactcagccgctctcagcctgttatgaaggtggcagtg
aagatgctgaaacccacggctcgctccagtgagaagcaggctctgatgtcggagctgaag
atcatgactcacctcggacctcatctcaacatcgtaaacctcctgggagcgtgcaccaag
tcaggccctatctacattatcaccgagtactgcttccacggcgacctggtcaactatctg
cacaagaacagggagagcttcctcagcctgagtccagagaaaaacaagaaggagctggac
atcttcgggatcaatcctgcggacgagaacagcaggagttacgtgatcctgtcctttgag
tgtaaaggagactacatggacatgaagcaggcggacaacacccagtacgtgcccatgctg
gagatgagcacgaccaagtacttgacacaggatcgggacaacacccctccccatgcggga
gatgagcacgcctcttactctctccagggatctaactacgaccaccctccttcacagaaa
gactcaggcgaatccgacaacctgctgtcagacgacacgagcgaaggcctcacgaccacc
gacctgctcagctttacctaccaggtggccaaagggatggagtttctcgcgtccaaaaat
tgtgtgcatcgggaccttgcagccaggaacgtccttctctctcaaggcaagattgttaag
atctgtgactttgggctggccagagacatcatgcatgacaacaactacgtctccaaagga
agcacctttctgccagtgaagtggatggccccggaaagtatttttgacaacctgtacacc
agccttagcgatgtctggtcatatggcatcctcctctgggaaatattcactctaggtggc
actccgtaccccgggatggtggtggactccagcttctacaacaaaatcaagagcggatac
aggatgtcaaaacctgagcacgctccgcaagacgtgtacgagatgatgataaggtgctgg
aacacagagccggaaaagaggccttccttcatgggtctgagtgaaaatgtggcgtctttg
ctgccctccagctacaagaggcactatgagaaggtgaaccacgactttctgaagagcgac
catcccgccgttacccgagtctgcatcgagacagacgccgactatgtcgacattccctac
aagaaccagggcaagctaaaggacagggaaagcggcttcgacgagcagcggctgagctcc
gacagcggctacatcatcccactccctgacctggaccctatatctgatgatgactacgga
aagaggaacagacacagctctcaaacgtctgaggagagcgccattgagactggctcaagt
agctccacctacgctaagcgcgagggcgagaccctggaggacatcacgctgttggacgag
atgtgtctggactgtagcgacctggtcgaggacagctttctgtga
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integrated database retrieval system
