Poeciliopsis prolifica (blackstripe livebearer): 129370013
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Entry
129370013 CDS
T09758
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129370013 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129370013 (dhx36)
03012 Translation factors [BR:
pprl03012
]
129370013 (dhx36)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129370013 (dhx36)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129370013 (dhx36)
Translation factors [BR:
pprl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129370013 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
129370013
NCBI-ProteinID:
XP_054901731
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MSYGHGGGGGRRSRHGGRGFRDGSRERLDRGGGGGGGGGRGFRGHGSDFDQDRGAGGGQK
DRPPPHLKGREIGLWYARYGAVRRKQADRRSRAMVHMDEAREEHITKLLNSVQSDPRDSR
GAQSSVSDAWRTAAGSDGGGHCYFDGDMPEEEKQKLEEEEDGSSKQKKTSRTSQRDSSAA
AKDEPPDNWDEDDEDDVEKEKPQSKDKDLEFLFQEVVRDASVDEDLKRDLQSKKMDRNYK
EMLKFREKLPSYGKKEDLVQLINSNRVLVVSGETGCGKTTQVTQFILDDHISRGRGSTCR
VVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQW
LRSDPLLSSVSHLVLDEIHERNLQSDVLLIIVKELLDLRDDLKVILMSATLNAEKFSKYF
DKCPMIHIPGLAFPVEEFLLEDVIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKEEE
YKESWPCYARTLQGRYSDGTIEAVEMLDTDEKIDLELILALIRHIVLNEGEGAILVFLPG
WDNISSLNDLLMAQQMFRSERFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETS
ITIDDVVYVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNG
LRASLLEAYQLPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLTDL
NALDQAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGK
EKMADMRRRTLSRNSKSDHLTIVYAFKGWEEAKQRGSRYEKDYCWDNFLSANTLQMLHNM
KGQFAEHLMSAGFVSSRDPKDAKSNINSDNEKLIKAVIVAGLYPKVAMIRPSYSKKRPGV
KVYTQTDGKVCIHPKSVNAEEREFSYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDI
TIQKDEGQETVAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISHPAPVDWENRQSKDC
AVITAIIDLITTQERPAGSSKDDDRTWASAPSGRHTYFDDDDDDD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggccacggcggcggagggggaaggagaagcagacatggaggtagagggttc
agggatgggagcagagagagattggaccgaggaggaggaggcggtggcggcggtgggaga
ggtttcagaggacacggttccgacttcgaccaggaccgaggagccggaggaggtcagaag
gaccgtcctcctccgcacctgaagggccgggagattggtttgtggtacgcgcggtatgga
gcagtgaggaggaaacaagcggaccgcagatcgcgggccatggtccacatggacgaagcc
agagaggaacacatcaccaaactcctcaactcggtccagagtgacccaagagacagcagg
ggcgcacagtcctcagtgtctgacgcctggcggacagcagccggcagcgacggcggcggc
cactgctactttgatggggacatgcctgaggaagagaagcagaaactggaggaagaggag
gacggttcttcgaaacagaagaaaacaagccgcacatctcaacgtgactcctctgcagca
gctaaagatgaacctccagacaactgggacgaagatgatgaggatgacgtggagaaggaa
aaaccacagagcaaagacaaggatctggagttcttatttcaggaagtagtcagagacgca
tcagtggacgaggacttgaaaagagatttgcaaagcaaaaaaatggatagaaattacaaa
gaaatgttgaaattcagggaaaaactaccatcatacggaaagaaagaggatctggtgcag
ctcatcaactctaaccgcgtcttggtggttagcggggagacggggtgcggaaagaccact
caggtcacccagttcatcctggacgaccacatcagcagaggccggggctcgacgtgccgc
gtggtctgcacgcagccccgccgcatcagcgccatctccgtagcagagcgtgtagctgca
gagagagcagaaagtgtaggaaatggaaattcctgtggttaccaaatacgcctgcagagc
cggttaccacggagacaaggttcaatactgtactgtacaacaggaattattcttcagtgg
ctccgctctgatccgctgttatccagtgtaagtcaccttgtgctggatgagatccacgaa
agaaaccttcagtccgacgttttgctcatcatcgtgaaggaattactcgacctccgagat
gacctcaaggtcatcctgatgagtgccaccctcaacgcagaaaagttctctaaatatttt
gacaaatgtccaatgatccacatccctggcttagcgttcccagtggaagagttcctgctt
gaagacgtcattgagatgaccagatatcgtccgcagaatcaggatcgtcggcctgcgtgg
aagagacgcttttggcagggccaccaatccagatcggagaaggaggagaaggaggaagaa
tataaggagagctggccatgttacgcacgaacgctgcagggcagatactctgacggcaca
atcgaggcggtggagatgttagacaccgatgagaagattgatctggagctgatcctggcg
ctgatccggcacattgtgctcaacgagggggagggagcaatcttggttttcctgcccggc
tgggacaacattagcagtctcaatgacctcctcatggcgcagcaaatgttccgatcagaa
aggttcgtcatcatccctctgcactccctcatgcccactgttaatcagacgcaggttttc
aaaagacccccgccaggagtcagaaagattgtgattgcaaccaatatcgcggagaccagc
atcaccatcgatgatgtcgtttatgtgatagatggaggaaagattaaggagaccaatttc
gacaccgacaacaacatcagcaccatgacggccgagtgggttagcttggccaacgccaaa
cagaggaaaggacgtgctggcagggtgcaaccaggaaagtgctatcatctgtacaatggg
ctgcgggccagcctgctggaagcctatcaattacctgaaattatgaggacaccgctggag
gagctctgcttgcagataaagattctgaagctcggctccattagtcgatttctggagaag
gccttggacccgccgagcgagaaggcagttaacctcgccatcaagagcctcacagacctg
aacgctctggatcaggcagagaatctgactgcgctgggtttccacctggcccgtctcccc
gtggagccgcacatcggcaagctgatcctgttcggcgctctgttgggatgcctcgacccc
gttctcaccatcgccgcttcgctcagcttcaaagaccctttcttcatacccctggggaaa
gagaagatggcagacatgaggagaaggactctgtccagaaactcaaagagtgaccacctc
actattgtttatgccttcaagggatgggaggaagccaagcagcgggggtccaggtatgag
aaggattactgctgggacaacttcctgtctgccaacacactccagatgctgcacaacatg
aaaggtcagtttgctgaacatctcatgagtgctggctttgtcagcagcagggatcccaaa
gacgctaagtccaatatcaattcagataatgagaagttgatcaaggcagtgattgttgct
gggctgtaccccaaggtggccatgatccgaccctcctacagcaaaaagagacctggggtg
aaggtgtacacccagaccgacgggaaggtgtgtatccatcccaaatcggtcaatgctgaa
gagagggaattcagctacacatggctcatttaccacctgaagatgagaaccagtagcatc
ttcctgtacgactgcaccgaggtgtccccgttctcgctgctgttcttcgggggagacatc
accatccagaaagacgagggccaggagaccgtcgcggtggaccgctggatcgtcttcagg
tccccggcgcgcatcgctcacctcgttaagagtttgaagagagagctggactcgctgttg
caagacaaaatcagtcacccggctcctgtggattgggagaaccgccagtccaaagactgc
gctgtcatcacggccatcatagacctcatcactacccaggaaaggcctgcaggcagcagc
aaggacgacgacaggacgtgggcgtctgcccccagcggaaggcacacttacttcgacgac
gatgacgacgatgattaa
DBGET
integrated database retrieval system
