Poeciliopsis prolifica (blackstripe livebearer): 129370107
Help
Entry
129370107 CDS
T09758
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129370107 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129370107 (fip1l1a)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129370107 (fip1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
DUF5946
DUF7725
Motif
Other DBs
NCBI-GeneID:
129370107
NCBI-ProteinID:
XP_054901776
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MFFWDSEYVGPDEDDGSFQWTYDSHDKETETEQSPHSSGQKPEKTELISEIRTDPVGCEK
EEGEDAVQNIHEVKEPKHDVEPVEEKPWRKSGADITDYFNYGFDEDSWKAYRMKHAKLQA
FQAQHIANLMREQAKYEMEMMCASSNSGRPSRKSCRRRKAKTTRRGGKGRSRRSREKARP
CRTDAAKDTQSVMRISHKKDTVTNYDMPRSVNVRTVFSFVPPPSSLFQFYQSESPTNTLS
SDNVGNIQEPSTSLYPCFPGNMSSDFAVVDSAKAWECYIKQQRSRDRDRDRDREYCHDKN
RRRCSDRDKQRSSLSRHSEKKLAERRDSVDYEYKRSRIEGVAGKKKQKEEEDASRKTSQR
SKSHTFPKKVATPAGRMTGRPGRRDTITQRAKTLRRLGE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttgggattcagaatacgtgggtcctgatgaggacgacggctcgtttcaatgg
acatatgacagccatgacaaggagacagaaactgagcagagtcctcatagctctgggcag
aaaccggagaagactgagttaatttctgaaataaggacagatccagttggctgtgaaaag
gaggaaggtgaggatgcggttcagaatatccatgaagtcaaagagccaaagcacgatgtg
gagcctgttgaggaaaagccatggaggaagtctggggctgatatcacagactactttaac
tacggtttcgatgaagacagctggaaggcgtaccgaatgaagcatgctaagctccaagca
ttccaagcacaacatatcgctaatctcatgagggagcaagctaaatatgaaatggagatg
atgtgtgcttcttctaattcaggcagaccatctaggaaatcctgcagacgaagaaaagct
aagaccactaggcgtggaggcaaagggagaagcaggagaagcagagagaaagcacgccct
tgtcgcaccgatgcagccaaagatactcagtcagtaatgaggatttcccacaagaaggac
accgtcaccaattacgacatgccacgttcggtcaacgtccgcactgtgttctcatttgtg
cctccaccctcttcacttttccagttttaccaatctgagtcccccactaacacactgagc
agcgacaatgttgggaacatccaggagccctcgacttccctgtatccatgttttcccggg
aacatgtcctcagactttgcagtggttgatagtgccaaagcctgggagtgctacataaag
cagcagcgtagcagagacagagacagagacagagacagagagtactgccatgacaaaaac
agacggcgatgcagtgacagagacaaacagaggtcttccttgtcacgccacagtgagaag
aagctggcggagcgcagggactctgtagattatgagtacaaacgtagcagaattgaagga
gtcgccggcaaaaagaagcagaaggaagaagaggacgcctcgcgaaaaacatcgcaaagg
tcgaaaagtcacacatttccaaaaaaagtagcaacgccagcaggaaggatgacagggagg
ccaggaagacgagacacaatcacgcaaagggcaaagacgctgagaaggctcggagagtga
DBGET
integrated database retrieval system
