KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129370164
Entry
129370164         CDS       T09758                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pprl01009]
    129370164 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprl03036]
    129370164 (kdm5bb)
Enzymes [BR:pprl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     129370164 (kdm5bb)
Protein phosphatases and associated proteins [BR:pprl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129370164 (kdm5bb)
Chromosome and associated proteins [BR:pprl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    129370164 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHD_5
Other DBs
NCBI-GeneID: 129370164
NCBI-ProteinID: XP_054901861
LinkDB
Position
Unknown
AA seq 1550 aa
MSLPRPDEFKPPPECPVFEPSWEEFRDPYAFINKIRPIAERTGICKVRPPPDWQPPFACD
VDKLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCTLKIPHVERKILDLYKLNKLV
ADEGGFDIVCQDRRWTKIAVQMGFSPGKAVGSHLRGHYERILYPYNLFQSGANLLAQEPA
SKLMRLEADPDLEKCVQKPDQSAEKMSDDEPKLQEPIQRAPAPPPDVCPSARRAKRMKIE
TTCVKTEPGEMGDSKPNLRRRMGSIVVKQEPEKPIPILVKQEPVEFKEPIIEADKFKSRY
KKMIPLVPLSPVDLVVCLVCGSGADEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPK
CLAQECSKPHEAFGFEQAHRDYSLRAFGQMADAFKSDYFNMPVHMVPMELVEKEFWRLVG
AIEEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADEKYLKCGWNLNNLAMMNPSVLTHV
TADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEKVMK
KLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFN
FAEAVNFCTVDWMPLGRQCVDHYRLLHRYNVFSHDEMVCNMATKAETLNVVLASAVHKDM
ALMIKEEQELRDKVKKMGVVNCKEAKYDHLQDDERQCAKCRTTCYLSAITCPCSPGVLVC
LYHINSLCSCPVSNYTLNYRYTMDDLFPMMNAVKQRAELYDEWASRVTQTLEAKLEKKKG
LPVFRSLLTESETRLFPDNDLLRRLRLVTQDAEKCASVAQQLLNGKKQTRYRCGSGKSRS
QLTVEELSSFVRQLYNLCCSLPQAPQLKELLNRIEDFQQHSEKVLVEESPSIAEIQSLLD
VSFDFDVDLPELPQLRERLEQARWLEAVQLASAQPNTLTLEAMRRLIDQGVGLAPHPSVE
KAMARLQEQLTLSEHWEDKASSLLKARPPHSIETLSAAAEKASVIPAHLPNCLLLKDAIR
KAREWLQEAEEQQASGCVLMVDRLSDMLLRGQAIQVQLEPLDRLESLMADVQKWKESAAA
TFLLKDSTLTLLEVLCPRFEAGAVGSPKRKAKKGKESLKNNKKKSTRLNCLSDVEKALSE
TKDSTSALATLEELRVREMETFFNLRAANESKLLPTADCMDLKVCFCQKAPMGAMLQCEL
CRDAFHSVCVRDPAESRETQPWLCPHCQRSEKPPLSKVLSLLASLHGVGVHLPEGDALNY
LVERTLNWQQRTQQILQTCNLPELEERPETPPTLTHWVSGCDNTHNNTQAPCLTPEWNRT
SHAQTVFYTEQRCIPLQGLNCELEELMVEGLLLQVSLPQVQSLYHILLDRANSQHSNRAV
SPAEDDPTEHSKHMEFISQGTNMALNEDGNDDTTDVMTDAMTDTMTASERKAKRRLERDG
LPNAEKRGKDKKHSHKRQKVNKKKLQRRPASTSSSPRSDFSQSDDSDEEMAVCPAESCLL
PEGDEVDWVQCDGRCNQWFHQVCVGVTAETAEKEDYVCVACSLNDRQTRK
NT seq 4653 nt   +upstreamnt  +downstreamnt
atgagcctgcctcggccggacgagttcaagcctcccccggagtgcccggtcttcgagccc
agctgggaagaatttcgagatccgtatgctttcatcaacaagatccggcccattgcagag
aggacggggatctgcaaagtccggccgccgccggactggcagccaccatttgcctgcgat
gttgacaagcttcactttgtccctcgcatccagcggctcaatgagctggaggcacagacg
agggtcaagctcaattttttggaccagattgccaaattttgggatttgcagggatgtacc
ctgaagatccctcatgtggagaggaagatcctggacttatataagctaaacaagctcgtt
gcagatgaggggggatttgacatcgtctgccaggacaggcggtggaccaagattgcagtt
caaatgggcttctctcccggcaaagccgtcggctcacacctgcgaggccattatgaaaga
atcctctatccctacaatctgtttcagagcggagctaacctgctggcacaagaaccagct
tccaaactgatgcgtttggaggctgatcctgaccttgaaaagtgtgtccagaaacccgac
cagtcggcagagaagatgagcgacgacgagcccaagctgcaggagccgattcagagagcg
ccggcccccccgcctgatgtttgccccagcgctcgccgagccaagcgcatgaagattgag
actacctgtgtgaagactgagccaggtgagatgggggatagcaagcccaatctgaggagg
aggatgggctctattgtcgtaaagcaagaaccagaaaaaccgattcccattttagtaaaa
caagaaccagtcgagtttaaggaaccaataatcgaagcagacaaattcaagtcccgctac
aagaagatgattcctctcgttcctctgagtccagtggatctggtagtgtgtctggtatgt
gggagcggagccgacgaggaccggctgctgctgtgtgacggctgtgacgacagctaccac
accttctgtctgatccccccgctgcacgacgtccccaaaggagactggcggtgccccaag
tgtctggctcaggaatgcagcaaacctcacgaggcgttcgggtttgaacaggcacacagg
gactattctctgcgtgcgttcggccaaatggcagatgcgttcaaatctgactacttcaac
atgccggttcatatggtacccatggagctggtggagaaagagttctggcgcctggttgga
gccatcgaggaggacgttaccgtggagtacggagctgatatcgcctccaaggagtttggg
agcggattccccatcccaaatggaaaatttaaggtttccccagcagatgagaaatacctt
aaatgtggctggaatctgaacaatctggccatgatgaacccatcggttctgactcatgtg
acagctgacatctgcgggatgacgctgccctggctctatgttggcatgtgcttctcctca
ttctgctggcacattgaggatcactggagctactccatcaactacctgcactggggcgaa
ccgaagacctggtatggtgctcctggctttgctgctgagcagctggagaaggtgatgaaa
aaactggctccagagctgtttgagtcccagccggacctgctgcatcaactggtcaccatc
atgaatcccaacactctgatggcgcacggcgtcccgatttacagaaccaaccagtgcgcc
ggtgagttcgtcatcacgtttcccagagcgtatcacagcggctttaatcagggctttaac
ttcgctgaggcggtcaacttctgcaccgtggactggatgcccctgggcaggcagtgtgtg
gatcactatcgtctgctgcatcgctacaacgtcttctcccacgatgagatggtgtgcaac
atggccaccaaagcagaaacgctcaatgtggttctggcctcagccgttcacaaggacatg
gccctcatgatcaaagaggagcaggaactgagggacaaagtcaagaaaatgggggtggtg
aactgcaaggaggcaaaatatgatcacctccaagatgatgagcgtcagtgtgcgaagtgc
aggaccacctgctacctttccgccatcacctgcccctgcagcccaggtgtgctggtctgt
ctctaccacatcaacagcctctgctcctgccccgtctccaactacactctcaactacaga
tacactatggatgacctgttccccatgatgaacgccgtgaagcagcgagccgagctctat
gatgaatgggcctctcgtgtcactcagactctggaggccaaactggagaagaaaaaaggt
ctgcccgtctttcgctctcttctcactgagtcagagaccagactgttccccgacaacgac
ctgctgcggcggctgcggctcgtcacacaggacgcagagaaatgcgcctcggtggcccag
cagctgttgaacggcaagaagcagaccaggtatcggtgcgggagtggaaagtctcgcagc
cagctaacggtggaagagctcagctcctttgtgaggcagctgtacaacctgtgctgcagc
ctcccgcaggcacctcagctcaaggaactcttgaatcggattgaagacttccaacagcac
agcgagaaggtcctggtggaggagtcacccagcatcgcagagatccagagcctcctggac
gtcagctttgacttcgatgtggacctgccggagttgcctcagctgcgggagcgtctggag
caggccaggtggctggaggccgtgcagttggccagcgcccagcccaacacgctcaccctg
gaggccatgaggagactcatcgaccagggagtgggcttggcaccgcatccgtccgtggag
aaagcgatggcgcggctccaggagcagctcactctgtcggagcactgggaggacaaggcg
agcagcctgctgaaggccaggccacctcactccatagagactctgagcgctgctgctgaa
aaggcttccgtcatcccagctcacctcccaaactgtctgctgctgaaagacgccatcagg
aaagcacgggagtggcttcaagaagccgaggagcagcaggccagcggctgcgtcttgatg
gtggacagactctccgacatgctgctacgcggacaagccatccaagtgcaactggagccg
ttggaccggctggagtctctgatggcagacgtgcaaaagtggaaagaatctgcagctgca
actttccttctaaaggactcgactcttacattgctggaggtcctgtgtccaagatttgaa
gctggagctgtcggttctccgaagaggaaggccaagaaggggaaagaatccctgaaaaat
aacaaaaagaaatccacacgactgaactgtctcagcgatgtggagaaagctctttcagag
accaaggactctacctctgcattggcgactctggaggagctgcgcgtgagggagatggaa
accttcttcaatctcagggcggcaaacgaatcgaagctcctccccacagcggactgcatg
gacctgaaggtgtgtttctgccagaaggcacccatgggagccatgctgcagtgcgagctc
tgccgggacgctttccacagcgtgtgtgtcagggacccggccgagtcgcgcgaaacccag
ccgtggctctgtccgcactgccagcgatccgagaagcccccgctcagcaaggtcctctcc
ctgctggcgtccctgcacggcgtaggcgtgcatctgccggagggcgacgccctgaactat
ctggtagagagaactcttaactggcagcagcgaacgcagcagattttacagacgtgtaac
ctgccggagttagaggagagaccggaaacacctccaacactaacccactgggtgtcgggc
tgcgacaacacccacaacaacactcaggctccatgtttgactccagagtggaacaggaca
agccatgctcagaccgtcttttacaccgagcagagatgcatcccactacaggggctgaac
tgcgagctagaggagctgatggtggaggggctactgctgcaggtgtcgctgccgcaggtc
caaagcctgtaccacatcctactggaccgagccaacagccagcactccaacagagccgtt
tcgccggccgaggacgacccgacagaacacagcaaacacatggagttcatctctcaggga
acaaatatggcactgaacgaggatgggaacgacgacacgacggacgtcatgacggacgcc
atgacggacaccatgacagcctcagaaaggaaggcgaagaggcgtctggagagggatggt
ttaccgaacgcagagaaaagggggaaagataaaaaacactcccacaaaagacagaaggtg
aataagaagaagctgcagcgccggccggcttcgacctcgtcctccccgcgctccgacttc
tcccagtccgacgattctgacgaagaaatggctgtgtgtcccgctgaaagttgtctgctg
cccgaaggagacgaggtggactgggtccagtgtgatggcagatgcaaccagtggttccac
caagtctgcgtcggcgtcacggcggagacggccgagaaggaggactacgtttgcgtcgcg
tgttcgctgaacgatcgacagacgagaaagtga

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