Poeciliopsis prolifica (blackstripe livebearer): 129370201
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Entry
129370201 CDS
T09758
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129370201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129370201
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Major cadherins
129370201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
DUF2254
DUF5527
Motif
Other DBs
NCBI-GeneID:
129370201
NCBI-ProteinID:
XP_054901941
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MRTDFAVVLTAALLFDTIWRNNGEHASQGPCQPGFSQSFYSVQISRDVLQGQGILKGTTV
SPQKVTFDDCMGNEAVVFQSTDPVFNVRTDGSIFAKGQGASLDETVQFKVTARGPHTNVW
ETMVQLILTDLSSSGQNENEVTEEAGHISEQNKKKNASQAPTPVIMFPGSHVNITRGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFSIDPVL
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIMTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENTV
DVAVANLTVIDADQPHSPNWNAVYRIISGDPTGHFTIRTDPVSNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLQSTAGVTISVKDVNEPPYFPTNPKQIRFEEGVPTGTSL
TTFSASDPDRLQMQQIIRYSKLNDPANWLSINRTSGQIVTTGMLDRESVYVKNNIYEATF
LATDNGSPEASGTGTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADTDPN
AGPFVFELPNFPSSIRRNWTIARISGDYARLALRYQIYLEPGMYEVPIIVSDSGNPPLSN
RSVIKVKVCPCDENGDCTTLGAVAAAGLGTGAIIFILICIIILLCMVLLFVVWIKRREKE
RQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgacttcgcagtggtcctgacagcagctcttctttttgatacaatttggagg
aataatggggagcacgcctcccaaggtccctgtcaacctggcttctcgcaaagcttctac
tccgtccagatatcgagggatgtactgcaaggccagggcatacttaaaggtacgacagta
tcaccacaaaaagtgacgtttgacgactgcatggggaatgaggccgtggttttccagagc
actgacccggtcttcaatgtccggacagatggatccatctttgccaagggacagggagcc
agtttggatgagacagttcagtttaaagtgacagcgcgtggccctcacacaaatgtctgg
gagactatggttcaactgatcctgactgacctgtcgtcatcagggcaaaatgaaaatgag
gtcacagaggaagcagggcacatcagtgagcaaaacaagaagaagaacgcgtcgcaggca
ccgactcctgtcatcatgttcccagggtcccacgtcaacatcaccaggggtctccgaagg
cagaagagagactgggtgatcccaccaatcaatgtggcagaaaattctcgtggaccattc
cctcagatgctcgtcagtattcgttccgaccaggaccaggacatctcaatccgttacagc
attactggggtgggagcagatcaaccacccaatgaggtgttcagtatcgaccctgtgctc
ggaaagatgtttgtcaccaaacctctggatcgagaacatcgatcttcttatcatctgcgg
gcccatgcggtggacatgaatgggaaccaggtcgagaacccgattgatctgtacatcttc
gttatcgacatgaatgacaacagaccagagttcaaaaaccaggtctacaatggttctgtg
gatgaaggttctaaaccaggaacttacgtaatgcatctatctgcatttgatgccgatgac
aacaccacagcgaatgggatggtgcgctatcggattctgtcccagacaccgcacagcccc
atccctaacatgttcaccatcaacagtgagacgggagacattatgacagtggcgcctgga
ctcgacagagagaaagtgtcccagtacaccatcattgtgcaagccacagacatggaggga
aacctcaactttggcctttccaacacagccactgccatcatcactgtcacggacatcaac
gataaccctcccatgctgacctcaagaactttttctggcgaggtcccagagaacacagtg
gatgttgcagtggctaatctgactgttatagatgctgaccagccccactctcctaactgg
aacgccgtttacaggatcatcagcggggacccaactgggcactttaccatccgcaccgat
cctgtttccaatgacggcatggtcaccgtggtgaagccagtcgatttcgagatgaaccgg
gccttcatgctgacagtggtcgtgtcgaaccaggcccacctggccagcggcatccagtct
tcactccagtcgactgctggagtcaccatatcagtgaaggacgtcaatgagcctccttat
ttccccaccaaccccaaacagatcagattcgaggaaggcgttcctactggcaccagcctg
accactttctcggcttcagatcctgacagactccagatgcaacagataatcaggtattca
aagctgaatgaccctgcaaactggctgtctatcaacagaaccagcggtcagattgtaaca
actggaatgctggaccgggagtctgtctacgtaaaaaacaacatatacgaagctacgttt
ctggctactgacaatggctctcctgaagccagcggcacaggcacattgcagatctatttg
atagatattaatgacaaccccccggcgctcgtaccaagggagtctcagatctgcgaaagg
atgaacaaaaatgtcaatggtgtcaacatcactgccgccgatgctgacacggatcccaac
gctggaccctttgtcttcgagctgcccaacttccccagcagcatccgacgcaactggacc
attgcacggatcagtggtgattatgcccgtctcgctcttcggtaccagatctacttagaa
ccaggaatgtacgaggtccctatcattgtgtcagactctggcaaccctccattatccaat
aggtctgtcatcaaagtgaaggtttgtccgtgcgatgaaaatggtgactgtaccacactt
ggtgctgtcgcggccgctggcctggggaccggagccatcatcttcatcctaatctgcatc
atcatactgctgtgcatggtgctgttgtttgtggtgtggatcaagcgcagagagaaagaa
aggcagacaaagcagttgctgattgaccctgaagatgacgtccgagacaacatcctcaaa
tatgacgaggagggcggaggagaagaggatcaagactatgacttgagccagctgcagcag
cccgactctttagaacacatcatcagcaaaccgcctggcgtacgcagagttgacgagagg
cccatcatcccagagtctcaataccccatcagaccagttgtgccccatcctggagacatt
ggagactttattcatgagggtctgcgggctgcagacaacgaccccacggctcctccgtat
gattccctgctcgtttttgactatgagggcagcggctccaccgccggctcagtcagctcc
ctcaactcttccagcacaggagatcaggactatgactacctcaacgactggggaccccgt
tttaagaagttggctgacatgtatgggggtggggatgatgattaa
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