Poeciliopsis prolifica (blackstripe livebearer): 129370238
Help
Entry
129370238 CDS
T09758
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129370238 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129370238 (ogg1)
Enzymes [BR:
pprl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129370238 (ogg1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129370238 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
129370238
NCBI-ProteinID:
XP_054902040
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MAKHAVLSSGAKLWRSLPCSKSELRLDLTLACGQTFRWRETADGHWTGVIGGRVWTLTQT
EDTLWYYVYTNQSGAGGENSSEDSLRAESVTASHHHHSEMEAEMLRDYFQLHVKLGDLYK
EWGAADSHFKKISDIFTGVRMLRQDPTECLFSFICTSNNHISRIQGMVERLCQALGSPLC
QLDQTSYHDFPTLSALADSGVEERLRDLGFGYRARFLQQSAKQILNTHGSQWLIGLRNVP
YLEARDSLRTLPGVGTKVADCVCLMCLDKCEAVPVDTHVWQIAKRDYKYTSDNGQKTLTE
KVHRDIGDFFRKLWGPFAGWAHSVLFCADLKKFQNLKEMTSLKQPKNEEEREGESKGLKI
KRAFDLHQKKKKPKLERQKKAKMSIKTEEV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtgttgtcttcaggggccaaattgtggcgatctttgccatgctca
aagtcggagctgcgactggatctcacccttgcttgtggacaaactttccgctggagagaa
actgctgatgggcactggactggagtcataggggggcgtgtttggaccctgactcaaacc
gaagacactctttggtactacgtgtacacaaaccagagtggagctggtggagaaaacagc
tcggaagactccctgagggcagagtctgtcactgcctcacatcaccatcactctgagatg
gaagcagagatgctgagagactacttccagttgcatgtgaagctgggggatctatacaaa
gagtggggtgcagcagactctcacttcaagaagatttctgacatctttacaggtgtgcgg
atgttgcgtcaggaccccacagaatgccttttttccttcatttgcacttccaacaaccac
atctcgcgtattcagggcatggtggagagattgtgtcaggctctggggagccctctctgt
cagctggatcaaacctcctaccatgactttccgacactgtctgcactggcagacagcggt
gtagaggaacgtctcagggatctgggctttggctacagggcgcggttccttcagcagagt
gctaagcagatcctgaacacacacgggtcccagtggctcattggtttacgaaacgtcccg
tatctggaggcccgtgattctctccgaaccctccctggagttggcaccaaagtggcagac
tgtgtttgtctaatgtgtctggataagtgtgaagcagttcctgtggacacacatgtttgg
cagatcgctaagcgggactataagtacacttctgataacggacagaagaccctcacagaa
aaagttcacagagatataggggattttttcagaaagctgtgggggccatttgcaggttgg
gcccattcagttttattctgtgccgacctcaagaagtttcagaacctcaaagaaatgaca
agtttaaagcagccaaagaatgaagaagagcgtgaaggagagagcaagggactaaaaata
aagagagcgtttgatttacatcaaaaaaagaagaaacccaagttggaacgtcagaagaag
gcaaagatgtccatcaagacagaggaggtgtga
DBGET
integrated database retrieval system
