Poeciliopsis prolifica (blackstripe livebearer): 129370247
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Entry
129370247 CDS
T09758
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129370247 (rbm39b)
Spliceosome [BR:
pprl03041
]
Common components
Common spliceosomal components
General mRNP proteins
129370247 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
129370247
NCBI-ProteinID:
XP_054902055
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSYHANGHDEHGKKKRRSRSRSRSPGSKKKKSRSRSKDRK
KSKKRSRSRDKKRSRSRERHRSGSRSRDRAGRYKARKSPIRKRSRSRSPFKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGGIPPPAVPSPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDRNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgattttgacgtcgaggccatgctggaagcgccttacagaaaggatgagaac
aagtcctatcatgcaaatggacacgatgaacacggcaagaagaagagaaggagtcggagt
aggagccgcagtccaggctcaaagaagaagaaaagccgtagcaggagcaaagacaggaag
aagagcaagaaaagaagcagaagcagagataaaaagcgcagccgcagcagggagcgccat
cgcagcggctccagaagcagagatcgggctgggcgctacaaagcacgcaagagccccatt
cgaaaacgttccagaagtcgaagtcccttcaaaaaagaaaagagtcctgttaggcaacca
atcgataatctgacaccagaggaaagggatgcccgcacagttttctgcatgcagctcgct
gctagaatcagagctcgtgacctggaggatttcttctcagctgttggaaaggtcagagat
gtgcgaatcatctctgacagaaactctcggaggtcaaagggcattgcatacatagagttt
gtggagtcgtcttctgtaccacttgcaattggactaactggccagaggcttttaggcgtg
cccatcattgttcaagcttctcaggcagagaaaaatagagctgctgctgcagccaataac
ctacagaagggcagtgcaggtccaatgagactttatgtgggttcactacattttaacatc
actgaagaaatgctgcgagggatttttgaaccttttggaaagattgaagggatccaactc
atgatggacagcgagactgggagatccaaaggatatggtttcatatcgtttgcagatgca
gagtgtgcaaagaaggcgttggagcagttgaacgggtttgaactggcaggacgtcccatg
aaggtgggacacgtcacagaacgttcagattcttccacggctagttcttttctggacaac
gatgagctggagaggactggcatcgaccttggcacaacaggccgtctgcaactcatggct
cggctggcggaaggaactggcttgaaaatcccccctgctgctcagcaggctctgcagatg
actggatccataccttttggaggcatacctcctccagcagttccgagtcctgcaccaagc
caagccttgaacctcccatcacagccgctggccacacactgcctgcagttgtccaacctg
tttaacccgcaggcagagaacgatcctaactgggcctctgaaatccaagacgatgtgatt
gatgaatgcaacaagcatgggggagtcgttcacatctatgttgacaggaactcacctcag
ggtaatgtgtatgttaagtgtccctcaatacctgcagcaatggcaacagtaaatgctctt
catggacgctggtttgcaggtaaaatgataacggctgcttatgttcctttaccaacctac
cacaaccttttcccagattcagtaacggcgaagcagcttctaatgccttcacgtcgatag
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