Poeciliopsis prolifica (blackstripe livebearer): 129370360
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Entry
129370360 CDS
T09758
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129370360 (nfascb)
04517 IgSF CAM signaling
129370360 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129370360 (nfascb)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
L1 family
129370360 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
VEGFR1-3_N_Ig-like
Izumo-Ig
Ig_PDGFR_d4
Pur_ac_phosph_N
Ig_MYOM1
BiPBP_C
Adeno_E3_CR1
Ig_ADGRF3
DUF6724
Motif
Other DBs
NCBI-GeneID:
129370360
NCBI-ProteinID:
XP_054902285
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MRTLVGPGLLLFLWQSVWALDVPLETRQPPTILKQSLQEHIVDPKETMVMECEAKGNPHP
IFSWRRNGKYFNVARDSQVSMRRRSGTLDIYAKHNPEQYEAEYQCIASNQYGSAYTHKIR
LRLYRPPVWPREILEPVVISAGLPLVLPCDAPPGPPKPETYWMSSCSYARPFNWPVQTAF
PTMQAVRQDRRVSMGVNGDLYFSNVLVNDSTTDYCCSARFPYKNMIQQKMPVVVKVLSTR
TVAEAAPTWLSPKGSSSSILVLQGEELLLECIAGGMPTPRITWTKDGEDLPVTPRMKVKN
FNKMIQIPKASFEDAGEYMCAATNKIGYIEHTITVRVRAAPFWLERPTNLILAPEENGQL
VCRSDGAPRPTISWSINGEPIETSTPQSNRQVSGETITFRSVSTENTAVYQCNASNEHGY
LLANAFVNVLHATPRIIGPRNELIKTIEGHHTFLDCRFFGSPVPELRWSRYGQGNLEGNR
FRIHRNGTLEIKRIQIEDQGTYLCVISNIAGRDETQVRVEVKEPIIIVTKPQSMKVLRGS
DVRLECAVKADITTPITTTWMKNKKQAALSWRVSMDESNLVITNVNRDDEGNYTCVIQND
LEQKSASAHLMVMDRPNPPTDLELSDPYERSVRLSWVPGDSNHSPITEYLVQYDDDDWIP
GKWKNLSTYPGTLNSVMLHLSPFTYYEFRVIAINEIGSSRPSRPSRRFQTSGAPPDVIPK
NLKGVGTWRNNMEISWEPLTWREWNGPHLKYLVWWRRRESREEWKNATTKWLKYYIYDAD
TFTPYELKVQAVNDFGLGPESPVVIGYSGEDRPIAAPLNLRVSDIESTQVTLHWDPVTRE
SIMGELKEYKVYYWRDSSQLRWHRVNRGMRSKVFPNSDPEPSGIVTDLIPYSNYKMYIVV
TNSRYEGPPSNNIHFSTPEGVPSAPRSFRIQQRHLDSIYVDWDLPEEPNGVITGYSLKYQ
TVNASRGEELKVEEFPPNVTSFSIRRYDRYTRYRFSVAAHTRIGLGEWHTEESPHYTTEI
YAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVRDKKDISLELVDDKDQ
EGTFDYRSLERIARVSTLPYPRREEERGLQRAQPSVEAILKRSDSDDSLVEYGEGGEIQF
NEDGSFIGQYTGIRRDVRDLDFGGNLELHSPMNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaggacactggttggaccagggctgctgctgtttctgtggcagagtgtttgggctttg
gacgtgcctcttgaaaccagacaacctccaaccatcctaaagcagtcgttacaggaacac
attgtggatcccaaagaaacaatggtcatggagtgtgaagccaaaggcaaccctcatcct
attttctcatggaggcgtaacgggaagtacttcaatgtggcccgtgactcccaggtgtca
atgcgcaggcgctcagggactctagacatctatgccaaacacaatcctgaacagtacgaa
gcagagtatcagtgcattgcctccaatcagtatgggtccgcatacacacacaagataaga
ctacggctctatagacctcctgtgtggccacgggagattctggagcctgttgtaatcagc
gctggccttcctctggtcctgccctgcgacgctccaccagggccccctaaacctgaaacc
tactggatgtccagctgttcgtatgcaagacctttcaactggcctgttcagacagctttt
cccaccatgcaggctgtgcggcaggatcgcagagtttccatgggggtcaatggagatttg
tatttctctaacgtgctggttaatgactccaccactgattactgctgcagcgctcgattt
ccttataagaatatgattcagcaaaagatgcctgtggttgtgaaggtgctttcaactcga
acagtggctgaggccgcccccacctggctgtctcccaaaggctcatccagctccattctt
gtgcttcaaggggaggaactgcttctcgagtgcatagctggagggatgccgactcctcgc
atcacctggactaaggacggtgaggacctgccagtgacaccacgtatgaaagtgaagaac
ttcaacaaaatgattcaaattccaaaggcgtcttttgaagatgccggagagtacatgtgt
gcagctaccaacaagatcgggtatattgagcacacaataacagtcagggtcagagcggct
ccattctggttggaaaggcctacaaatttgatcttggctcctgaggaaaatggacagctg
gtgtgccgctctgatggggcccctcgaccgacaataagctggtccataaacggagaacca
attgagacgtctacaccgcagtctaacaggcaggtgtctggagaaacgataacctttcgc
agtgtgtccacagaaaacactgctgtctatcagtgcaatgcctccaatgagcatgggtat
ctactggccaatgcatttgtcaatgttctacatgcaacgcctcgtattattgggcccagg
aatgagctcataaagacgatagagggacatcatacctttttagactgtcgcttctttggc
tctcctgttcctgaactgcgatggtccagatatggacaaggaaatcttgaggggaatcgt
ttcaggatccacaggaatgggactctggagatcaaacgcatccagatagaagatcagggt
acctatctgtgtgtgatcagcaacattgcagggagagatgagactcaagtccgagtagaa
gtcaaagagcccataataattgtgaccaaaccacagagtatgaaagtcctacgtggaagt
gatgtgcgcctagagtgtgccgtgaaagcagacatcactacaccaatcacaacaacatgg
atgaaaaacaaaaagcaagctgctctcagttggagagtatcgatggatgaatcaaatctg
gtcattactaatgtaaatagagatgatgaggggaattatacgtgtgtcatccaaaatgac
ctggaacagaagtctgcatcagcacacctaatggtgatggaccgaccaaatcctccgact
gacttggaactgtcagatccatatgaacgcagtgtgcgactcagttgggttcctggagac
agcaaccacagccccattactgagtatttagtgcagtatgatgatgatgactggatacca
ggaaagtggaaaaacctatcaacatacccaggaactctcaactctgtcatgctgcatctg
tcacctttcacctactatgagttcagggttattgctatcaatgaaattggatcgagtcgt
cccagtcggccatctaggcgcttccagaccagcggcgcacctcctgatgtcattccgaaa
aatctgaaaggggtgggcacatggagaaataacatggaaatcagctgggagcctctgaca
tggcgagagtggaatggaccacacttgaagtatctggtttggtggagaagaagagaatcc
agagaggagtggaaaaatgcaaccacaaagtggctgaagtattacatttatgacgcagac
acattcaccccctacgagctcaaagtccaggcagtcaatgactttgggcttggacccgag
tcgcccgtggtcattggttactctggtgaagaccgtccgatagcggcccccctgaacttg
agagtgtctgacatcgagagcactcaggttacattacattgggacccagtgacacgtgaa
tctattatgggagagctcaaagaatacaaggtctactactggagagacagcagccagctg
aggtggcacagggtcaacagaggcatgaggtcgaaagtgtttccaaacagcgatccagaa
ccctcaggcatcgtcactgacctcattccttatagcaattacaagatgtatatagttgtg
acaaacagccggtatgaaggaccgccaagtaataacatccacttctctacaccggaagga
gtaccatctgctccaagatccttcaggatccaacagcgacatctggacagcatttatgtt
gactgggacctaccagaagagcctaatggtgttatcactggttacagcctgaaataccag
acagtgaatgcaagcagaggagaagagctgaaagtggaggagttcccaccaaatgtgaca
agcttctccattcggcgatacgaccgctacactcgctacagattctctgtggctgcacac
actcgaatcgggctgggagaatggcatacggaggagtctccccactacaccacagagata
tatgctcaggaccaggtggacatttccactcagggatggtttattggcatcatgtgcgct
gtggctctcatcgtgctcatcctcctcatagtgtgtttcatcaagaggagccgaggagga
aaatatccagtgcgcgacaaaaaagacatttcattggaactggtggatgataaagatcag
gagggaacatttgattacaggtcccttgaaaggatagcacgtgtctcaactttgccctat
cctcggcgagaggaggaaagagggctccagagagctcagccatctgtggaggcgatactg
aagagatcagacagtgatgacagcctggttgaatatggagaaggaggagaaatccagttc
aatgaggacggatcgttcatcggccagtatacaggaataaggagagatgtcagggatttg
gactttggtgggaatctcgagctccactctccgatgaataccatctactctctggcatga
DBGET
integrated database retrieval system
