Poeciliopsis prolifica (blackstripe livebearer): 129370553
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Entry
129370553 CDS
T09758
Symbol
dscama
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule a
KO
K06767
Down syndrome cell adhesion molecule
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129370553 (dscama)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
DSCAM family
129370553 (dscama)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
C1-set
C2-set_3
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
129370553
NCBI-ProteinID:
XP_054902589
LinkDB
All DBs
Position
Unknown
AA seq
2025 aa
AA seq
DB search
MWILALIFSQCILNVFCEDLRSSLYFVNASVQEVVFASTTGTSVPCPAAGVPPVSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHIPPSSFSKLIHDNTYYCTAENPSGRIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTMSINAEMSRFLITSTG
ALYILDVQMEDGLYNYRCMTRHRYTGETRQSNSARLIVSDPTNSAPHILDSFERREVMTN
HRVELPCKASGHPAPKYRWLKDNRPLEPDTRFRQSVTGLLIERAQPSDTGAYVCEVWNGY
GNAEVVGRLHVKEPLKVMVSPRKVKGSVGSQVSLTCGVTGSEEYQLSWYRNGELIYPSNS
VRMTGQSRENLVMAGMAKSDGGAYQCFARHGKMSAQDFVQVILEDGTPKILASFSEKVYN
VNEFVSLSCTVKGTPEPRVTWSLDDEPVIRDSRHRISYYINGEGHVVSHLNITQTQVPDG
GVYRCICNNSAGTVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYK
DSNLLPYNHRQRAFENNGTLKLFDVQKDVDEGEYTCNVLVQPQLSTHQSVYVTVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNL
TLAHNGNYTCIARNQAAAVEHQSQLIVRVPPKFVVQPKDQDAIYGKAVILNCSAEGYPVP
TIQWEYSKGAGVPQFKPIALNSGFRIEVLVNGSLLIKHVLEEDSGFYLCRVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGEEKKMSCTAHGEKPIMVRWEKEERIINPETSRYVV
SVKEVGDEVISTLQIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVK
DRTIALRWTMGFDGNSPITGFDIESKNKSASWDTAQKTKDVSPQLNQATIIDLHPSSTYN
IRMFAKNLIGKSEASNELTITTDEAAPDGPPQDVQLEALSSQSIRVTWRPPKKHLQNGAI
RGYQVGYREYSSGGNYQFSVISVETTGDNAESLVLDNLKKFTQYGVVVQASNSAGTGPSS
TEVAATTLEDVPSRPPENVQAVATSPEVISLSWLTPPKDALNGNLLGFRVIYWANLPDGE
LGEIRNVTTSKPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVK
AAAASNSVVFVSWLPPLKVNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSRNRQ
YSIWVVAVTAAGRGNASEIITVKPMAEAPARILTFNRTVTTPWMRDIVLPCKAVGDPSPT
IKWLKEINGTPAPVVIDSRRSVHGNGSLVIRTVKAEDSGNYTCVASNSFGSDKIVLNLQV
QVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGNFAISPSERSY
RLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINATRVKLNL
NGWNNGGCPITSFTLEYRAVDAPTWTTAQRTSLTKSYILYDLQEATWYELQMKVSNSAGY
AEKRVKFATLSYDGSTIAPLVKAPNVSEDTSGGGEGLKMMVTISCVLVGIVVIFIGLLVL
RRRRREQRLKRLRDAKSLAEMLMSKNTRPAEPINKQQQTLRMHIDIPRAQLLIEERDTME
TVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTA
KAGPAARNRYASQWTLNRPXPPVSSHTLSTDWRLPTPRVAGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTD
SLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGM
SCSGSSRGTAGGERAAMGQTCLEPQKSRSLKRPSRMAPPTPTEAPQASRDPAAQWQPGSA
ATLPHREGSELAQAAKLSTSQESLLDSRGHLKQSSNPYAKSYTLV
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctcttatcttttcccagtgcatcttgaatgttttctgtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacatcggtgccctgtcccgctgcaggtgtgccccctgtctcactgcgctggtacctg
gccaccggcgaggagatctatgatgtgccagggatccgccatgtgcaccccaatggcacc
cttcagatcttccacatccccccttccagcttcagcaaactcatccacgacaacacttac
tattgcacagcggagaacccctcagggagaatcaggagccaagatgtccacatcaaggct
gtcctacgagagccgtacactgtccgggtggaggaccagaaagccatgagaggcaatgtg
gcggtcttcaagtgcattatccctgcctcagtggaggcctacatcactgttgtgtcctgg
gagaaagacacaatgtcaatcaatgctgaaatgtcacggtttctaataacgtccacgggc
gccctgtatatcctggatgtgcaaatggaagacgggctttacaactacaggtgtatgaca
cgacatcggtacacaggagagacccgacagagcaatagtgcccgtctcattgtctcagat
ccaaccaactcagcaccgcacatactggacagcttcgagcgtcgcgaggtgatgacgaat
catcgagtggagctgccctgcaaggcctcaggtcacccggcacccaaataccgttggcta
aaggacaaccgaccgctggaaccagacacacgctttagacagagtgtcacaggcctgttg
atagagagagcccagcccagtgacacgggggcatatgtgtgtgaagtgtggaatggctac
ggcaatgccgaggttgttggcaggttgcacgtaaaagaacccctgaaggtaatggtgagt
ccacggaaggtgaaaggcagcgtgggaagccaggtttccttgacctgtggtgtaactggc
tctgaggagtatcagctatcttggtaccgcaatggagagctcatttaccccagcaacagt
gtccgcatgacaggccaaagcagagagaatctggttatggctggaatggccaagagcgac
ggaggagcctatcaatgcttcgccaggcatggcaagatgtctgcccaggactttgttcaa
gtgatacttgaagatggcaccccaaagattctggcttcgttcagcgagaaggtctacaac
gtcaacgagtttgtgtcactgtcgtgtacggtgaagggcacaccggagcccagagtaacg
tggtcgctggatgacgaacctgtgatccgggacagtcggcaccgcatctcctactacatc
aacggcgaaggccacgtggtcagccacctcaacatcacccagacccaggtccctgacgga
ggggtgtaccgctgcatctgcaacaactcggcagggacggtttcctaccaggcgcgaata
aacgtaagagggcctgccagcatcagaccaatgaaaaacctcactgccattgctggccgg
gacatgtacatccactgccgcgtcatcggctacccttactattccatcaagtggtacaag
gactccaatttgctgccgtacaaccaccggcagcgggcctttgagaacaacggcaccctg
aagctgtttgatgtgcagaaggatgtggacgaaggagaatacacgtgtaacgtgctggtg
cagcctcagctgtccactcaccagagcgtctatgtcactgtcaaagtcccacctaccatc
cacccgtttgagtttccccggttctccatcggccagcgagtcttcatcccgtgcgtcgtc
atgtccggcgaccagcccgtcttcatcacctggcagaaggacggccggcctatcccggcc
agcctgggcgtcaccatcgacaacatcgacttcaccagctcgctgcgcatctccaacctc
acgctggcccacaacggaaactacacctgcatcgctcgcaaccaggctgctgctgtggag
caccagagtcagctcatcgtccgagttcctcctaaatttgtggtgcaaccaaaggaccag
gatgccatctacggcaaggcggtgatcctcaactgctcagctgaaggctatccagttcct
accatccagtgggagtactccaaaggtgccggggtgcctcagttcaaacccatcgccctc
aactcaggctttcgcattgaagttctggtgaacggctctctgctcatcaagcacgtgctg
gaggaagacagcggcttctacctctgtcgggtcagcaacgacgtcggcgccgatgttagc
aagtccatgtatctgaacgtcaaaattcctgccatgatcacgtcctacccaaacaccacg
ctggccacgcagggagaggagaagaagatgagctgcacggcccacggagaaaaacccatc
atggtgcgctgggagaaagaggaacgcatcatcaacccggagaccagccgctacgttgtt
tccgttaaggaggtgggcgatgaagtcatctccaccctgcagatcatgcctacagtgagg
gaggactcaggcttcttctcctgccatgccatcaactccttcggtgaagatagaggaatc
attcagctcacagtgcaagagccgccggatcctcctgaggtggagatcagagaagtgaag
gacagaaccatcgctctgcgatggaccatggggtttgacggcaacagtcccatcacaggc
ttcgacatcgagagcaaaaacaaatcagcgtcctgggacacggctcagaagaccaaagac
gtctcgcctcagctgaaccaggcgaccatcatcgacctccacccctcttcgacttacaac
atccgcatgtttgccaagaacctcatcgggaagagcgaggccagcaacgagctcaccatc
accacagatgaagcagctcccgatggtcctcctcaagacgtgcagctggaagctctctcc
tctcagagcatccgggtcacatggaggccgcccaagaagcacctgcagaacggggcgatc
cgcggctaccaggtgggctaccgggagtacagctccggtgggaactaccagttcagcgtg
atcagcgtggagacgactggggacaacgcagagagcctggtcctggacaacctgaagaag
ttcacccagtacggagtggtggtccaggccagcaacagcgccgggaccgggccgtcttcc
actgaggtggctgccaccactctggaggacgtgccgagccgtcctcctgagaacgtccag
gccgtggccacgtctccagaggtcatctccctgtcctggctgactcctcccaaagatgcc
ctgaacggcaacctgctgggcttcagggtcatctactgggccaacctgcctgatggagag
ctcggggagatcaggaacgtcacgacctcgaagccctcgctggagctggacggactggag
aaatacaccaactacagcatccaggtgttggccttcaccagagcaggagacggcgtccgc
agtgagcagatttacacccgcaccaaggaggacgttcctggtcctccagccggtgtgaaa
gctgcagctgcatccaactcagtggtgtttgtgtcctggcttcctcctctcaaagtgaac
ggcatcatcaggaaatacacagttttctgctccaatccacaccctacggtgagcagtgaa
ttcgaagcggctccagatgttttcttctaccgcatccctaacctgagcaggaaccgacag
tacagcatctgggtggtggccgtcactgccgcaggccgcggaaatgccagcgagatcatc
actgtcaaacccatggctgaagctccggctcgaatcctgaccttcaacaggacggtcacg
actccctggatgagggacattgtgctcccctgtaaggcggtcggcgatccgtccccaacc
atcaagtggctgaaggagatcaatggaaccccggctcctgttgtgatagacagccggcgg
agtgtccacggaaatggcagccttgttattcgcacagtgaaagcggaggattctgggaat
tacacttgtgtggccagtaatagctttggttcagataagatcgtcctcaatctgcaggtt
caagttccacctgaccaacctcgcctcaccgtcaccaagacaaccaccacctcaatcacc
ctctcttggatcccaggagacaacggcggcagctccattcgaggctacatcctgcagtac
tcggaggataacagcgaacagtggggtaacttcgccatcagtcccagtgagcgctcctat
cggctggaaaacctcaagtgtggcacctggtacaagttcaccctcacggcccagaacgca
gtcggtcctggtcgcatcagtgaaatcatagaagcaaagacccacggcaaagagcctcaa
tactcaaaggaacaggagcttttcaccagcatcaacgccacccgggtcaagctcaacctc
aacggctggaataacggcgggtgtccgatcacctcctttaccctggagtaccgggccgtg
gatgcgcccacctggaccacggcgcagcgcacgtccctcaccaagagctacatcctgtac
gacctgcaggaggccacctggtacgagctgcagatgaaagtttccaacagcgccggctac
gccgagaagagagtcaagtttgcgacgctcagctacgatgggagtaccatcgcccctttg
gtgaaagcgcccaatgtgagcgaggacacgtccgggggaggcgaaggtttgaagatgatg
gtgaccatttcctgcgtgttggtggggatcgttgtgatcttcattgggctgctggtgctg
aggaggaggaggagggagcagaggctgaagaggctgagagatgcgaaaagtttggctgaa
atgctcatgagtaaaaacacgcgtccggcagaaccaatcaacaaacagcagcagacgctg
cgcatgcacatcgacatccccagagcccagctcctcattgaggagagggacaccatggag
accgttgacgacagatccactgtgctgctgacggataacgacttcggagagacgcagaag
caaaagtcgtccacggtcacccacactgtccactaccagtccctctcccaagccactggt
ccactggtagatgtatcagatgccaggccaggaaccaacccgactgcccgccgtacagcc
aaagccggcccagctgcccgcaaccgctacgccagccagtggactctaaaccgccccnca
ccccctgtctcctcccacactctcagcactgactggcggctgccaacacccagagtcgcc
ggctctgttgacaaagagagtgacagctacagcgtgagtccatctcaggacacagaccga
gcgcggagcagcatggtgtccacagagagcgcctcttccacctacgaggagctggcccgg
gcctacgagcacgccaagatggaggagcagctgcgccacgccaaatttaccatcaccgag
tgcttcatctccgacacttcctcggagcagatgacggccggcaccaacgactacaccgac
agcctgacgtccagcacgccgtccgagtcgggcatctgccgcttcactgcttccccgccc
aagcctcaggacgtcagccgggtcatgaacatggccgtgcccaaggcccacagaccggga
ggcgagctggttcaccttcctccatacctgcgcatggacttcctgttaaaccggggcatg
tcctgctccggctcctccagggggacagcaggcggcgagagagccgccatgggccagacc
tgcctggagccccagaaaagccgctcgctaaagcggccgtctcgcatggcgccgcccacg
cccacggaggcccctcaggccagcagggacccggcggcccagtggcaacccggctcggcg
gccacgctcccccacagggagggctcggagctggcccaggctgccaagctcagcacctcc
caggagtccctgctggactccagaggacacctgaaacagagcagcaacccctacgcaaag
tcctacacgctggtataa
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