Poeciliopsis prolifica (blackstripe livebearer): 129370609
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Entry
129370609 CDS
T09758
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129370609 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129370609 (nup98)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129370609 (nup98)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129370609 (nup98)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129370609 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
129370609
NCBI-ProteinID:
XP_054902675
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGTSSAFGQQNTGFGAAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGGATGTSTSLFGNTGTGTSGGLFSQQSNAFGANKPTSFS
SFGTSTSSGGLFGSTNTTTNPFGASSSLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGAGSLFSGATPTSSAST
GLFGATASNSNFNFGANKSTFGPATGSFGTSTNSLFGQQNQQQANSLFKPFGATTTTQSF
NFGNTNTMGQPNTSTMGLFGSTVASQPGGLFGPTQTSTATGFGTSSGMFGQPSAGFGTVG
TQPSLFGNKTTGFGTTTTSASSFGTNTGLFGNKPALTLGTGTNTSTFGFGANPAGGGLFS
NKLATGGLGTGLGTNFPTVGTGTTLFGNTQNKLGTASGTLGGFGTSGFSSGSSLGFGATQ
QPVALTDPNANAAQQAILQQQLNVLTYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKA
LTTPTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLK
NLSSSQYSSSSLNKDSDDLASPSEYPQNGHSQAEDDELREVPGVSGRADDDPEVTQFYVN
PIAKPIPQGRAQPSLQDTISDLNMHKQPRNGLELSSEDVSASFGEDSLQEDREEEDQQES
KPSPHPAGIVLNRVGYYTIPPLDDLAEMLDENGECVVENFTVGRKGYGSVFFPGEVNLTG
LNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERLTD
MNYEGRLEKASRKQGARFLEYRPETGSWVFEVSHFSKYGLQDSDEDDEVPPKTDPKKLKT
MMSLPASRLQQLLPPSQQQVAPLAQSTAVDLASGVAELDSDMADITQGIPTESMLGGEEE
DGELPLVNMETLTNHEPVACSHIPSTLGINPHTLQIMKASLFTEDEEDGDMFQPQRATKV
SADVSSPRLILPSSEGRPSVGGLLQTRFTSGIFPQRMDSPLSRGSPAAADPLRPPQWKSP
VPAPFLLPARAPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVGWGPG
WTLAHCGSRLSAQSADQTELQERRTKTDFSFLHKPARTKPLAESPFKVVVEQLVGLEAPQ
GMKMSEEEEEEERHAVLQRPLEISLKHSTVSVPQGASCPLVEPRPGVAALHDYAEWIREL
SAERGDADPVLGHWAEVWTLCEALWGQLDPDGGPLDDYQQQLQRHCAFSDWLARGAARRV
EEEVALAGKGRHAEAVFSYLTGRRVSEACQLAQREGDHRLALLLSQASGSRFCRQLLDLQ
LADWSRTQTDLHLSEERLRIFALLAGKPVWQSSGSAVNVCSELDWKRCLAVHLWYLLPPT
ASVADALAAYEAAFQGSTEAGRYACTPLPPYLEGAPPLEEDEEEEPERPMLDLCFHLLKL
YSDRLYGLQPLLDPLTVTWQRLDYRLSWHLWGVLQALRYTHLAAPRQGLVHSAYAAQLES
AGLWHLAVFILLHVPDHRERERAVRELLALHCPLLETEESARRERFLTDRLLVPESWIHE
AKAVRAQRDGDRHRQALHLYRAGHWNQCHRLLIQHLASDCIVNDNHDYLLEFLEGLAVPE
HSASIQDWDTSGRVYLDYIRVIKSLQDIQQTDGAGYQLERLYSDVTSLCSRIELLPCRTA
RDHLAQSEMAKRVANILRVVLSLQQGDGAADPLSIPLAQLAPHISRLPMPEDYALEELRG
LTQSYLRQLVVSQ
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcgtttgggactccgtttggcggtgggacggggggcttcggcacctct
tctgcctttggccagcaaaacacgggtttcggtgcagcaggaggttttgggacgtcggcg
tttggggcgaccacaaacaccggaggattgtttggctccacgcagaacaaacctggtggt
ctgtttgggtccagcactttcagccagccggcaacttcctccaccagcaccgggttcggg
ttcggtggcgccaccgggacttccaccagcctgtttggaaacactgggaccggaaccagc
ggcggtctcttctcccagcagagcaatgcgttcggcgccaacaagcccacttccttcagc
agctttgggaccagcaccagcagcggcggcctgtttggttccaccaacaccaccaccaac
ccgttcggcgcttccagctcgctgttcggaggctctggctttgcagccaatcagcagcca
ggaaccacagtgaaattcaatcctccaacaggaagtgacacgatggtgaaagccggcgtg
accacaagcatcaacaccaaacaccagtgcatcaccgccatgaaggagtacgagaacaag
tctctggaggagctgaggctggaggactaccaggcgggcaggaagggccccaccaacccc
atggcgcccggcgccggcagcctgtttagcggggccacccccacctccagcgcctctacc
ggactcttcggtgccaccgcctccaactccaacttcaacttcggggccaataaatcaact
tttggacccgccaccggatccttcggaaccagtaccaacagcctgtttggccagcagaac
cagcagcaggccaacagcctcttcaagccgttcggcgccaccaccaccacccagagcttt
aactttggcaacaccaacaccatgggccagcccaacaccagcaccatgggtttgtttggc
agcacggtggcctctcagccgggcggattgttcggacccacccagaccagcaccgccacc
ggctttgggaccagttctgggatgtttggccagccaagcgctggctttggaaccgttggc
acacagcccagtctgttcgggaacaaaaccaccgggttcggaaccaccactaccagtgct
tcgtcatttggcaccaacaccggactctttgggaacaagcccgctctgactctggggacc
ggaaccaacacctccactttcggttttggagcgaacccggctggaggaggactctttagt
aacaaactggccactggtggactgggaaccggactaggaaccaactttccgacggtcgga
accgggaccactctgtttggaaacacccagaacaagctgggcacggcgtcgggaaccctg
ggaggcttcggcaccagcggcttcagcagcggcagcagcctgggcttcggggccacgcag
cagcccgtcgcgctgacagacccgaacgctaacgccgcccagcaggccatactgcagcag
cagctcaacgtgcttacctactctccgtacggcgactctccgctcttcaggaacccgctg
agcgaccccaagaagaaggaggagcgtctgaagccgaccaatccaacggcccagaaggcg
ttgactacacccacccactacaagctgaccccgcgacctgccaccaaggtccggcccaaa
gcgctcacgtcgtccggcgcctccaagtcgcagctctttgacggtctggacgacgacgag
ccgtcgctcaccaacggagccttcgtgcccaggaagagcatcaagaagctggttctgaag
aacctgagcagcagccagtacagcagcagcagcctgaacaaagacagcgacgacctggcc
tcaccgtcagagtaccctcagaacggacacagccaagcggaggacgacgagctcagggag
gttccaggtgtgagcggccgagccgacgacgaccccgaggtcacccagttctacgtgaac
cccatcgccaagcccatcccgcagggccgcgcccagcccagcctgcaggacaccatcagc
gatctgaacatgcacaagcagcccaggaacggcctggagctgagcagcgaagacgtctct
gcgtccttcggtgaggactctctgcaggaggacagagaagaggaggaccagcaggagtcc
aaaccgtctcctcaccctgcaggtatcgttctgaaccgggtgggttactacaccatcccc
cctctggacgacttggccgagatgttggacgagaacggagaatgcgtcgtggagaacttc
accgtgggcaggaaaggctacggctccgtcttcttccccggagaggtcaacctgacaggc
ctgaacctggatgagatcgtccacttcaggcgcaaagaggtcatcgtttacccggacgac
aagaacaagccgccggagggggaggggcttaaccggcgggctgaagtgaccctggacggc
gtctggcccaacgataagacgacctgcgctcagatccgcagcccagagagactcaccgac
atgaactacgagggccggctggagaaggcctccaggaagcagggcgcgcgcttcctggaa
taccgacccgagaccggctcctgggtgttcgaggtcagccatttctccaaatacggcctc
caggactcagacgaagacgacgaggtcccgcccaaaaccgaccccaagaagctgaagacg
atgatgtcacttcctgcttccaggctgcagcagctgcttcctccatcccagcagcaggtg
gcgccgctggcccagtccaccgccgtggatttagcgagcggcgtggcggagctggacagc
gacatggccgacatcacgcagggcatcccaacagagagcatgctgggaggagaggaggag
gacggcgagctgccgctggtcaacatggagacgctgacgaaccatgagccggtggcgtgc
agccacatcccgtccactctgggcatcaacccgcacacgctgcagatcatgaaggcgtct
ctgttcactgaggatgaggaggacggcgacatgttccagcctcaaagagcgaccaaggtg
tctgccgacgtctcgtcccctcggctcatcctgccgagctctgaaggccgtccatctgtc
gggggtcttcttcagacccgcttcacctccggcatcttccctcagcgtatggactctcct
ctgtcccgcggctccccggctgcagccgacccgcttcggcctccacagtggaagagtcct
gtccccgccccgttcctgctgccggcccgggccccggagcccgccatcaggacggtaggg
gtgcggcgactgggcggccccgtccctctgaaggagtccgtcactcaggggaagggggca
ctgctgatggacaccggcctgttcgccacccgctccttcagagtgggctggggtcccggc
tggactctggcccactgcggcagccgactcagcgcgcagtccgccgaccagacggagctc
caggagcggcgcaccaagacagacttcagcttcctgcacaaaccggcccggaccaaacct
ctcgctgaaagccccttcaaggtggtggtggagcagctggtgggactggaagctcctcag
gggatgaagatgagtgaggaagaggaggaggaggagcggcatgctgtgctgcagcgcccc
ctggagatcagcctgaagcacagcaccgtcagcgtcccacagggcgcatcctgtccgctg
gtggagccgcggcccggcgtggcggcgctgcacgactacgccgagtggatcagggagctg
agcgcagagcgcggagatgctgaccccgtcctgggccactgggccgaagtctggacgctg
tgcgaggccctgtggggccagctggacccagacggcggccccctcgacgactaccagcag
cagctgcagcgccactgcgccttttccgactggctggcccgcggcgccgcccgcagggtg
gaggaggaggtggcgctggcggggaagggccgccacgcggaggcagtgttcagctacctg
acggggcgccgcgtcagcgaggcctgccaacttgcccagagggaaggcgaccaccgcctg
gccctgctgctgtcacaggcctctgggtcgcggttctgccgccagctcttagacctgcag
ctggccgactggagccggacgcagactgacctccatcttagcgaagagcggctgcggatc
tttgccctgctggctgggaaaccggtgtggcagtcgtccgggtcagcggtgaacgtctgc
tcggagttggactggaagcgctgcctggccgtccacctgtggtacctgctgccgcccacc
gcctccgtggctgacgccctggccgcctacgaagctgctttccagggctccacagaggcc
ggcagatacgcctgcacaccgctgccaccatacctggagggggcgccacctctagaagaa
gacgaggaggaggagcctgaacggccgatgctcgacctttgcttccacctgctgaagctc
tacagcgacagattgtacggcctgcagccgctgctggacccgctcaccgtcacctggcag
cgcctggactaccggctcagctggcacctgtggggcgtgctgcaggcgctgcgctacacc
cacctggccgcgccgcgccagggcctcgtccactccgcctacgccgcccagctggagagc
gccggcctctggcacctggccgtcttcatcttgctgcacgtccccgaccacagggagcgg
gagcgcgcagtcagggagctgctggcgctgcactgccccctgctggagacggaagagtcg
gcccgcagggagcgcttcctgaccgacaggctgctggttccggagagctggatccacgag
gccaaggcggtccgggcccagcgggacggggaccggcaccgccaggccctgcacctgtac
cgggccggacactggaaccagtgccaccggctgctgatccaacacctggcctcagactgc
atcgtcaacgacaaccacgactacctgctggagttcctggagggcctggcggtaccagaa
cacagcgccagcatccaggactgggacacgtccggcagagtctacctggactacatccgg
gtcatcaagtccctgcaggacatccagcagacggacggcgccggctaccagctggagcgg
ctctactctgacgtgacgtcgctctgcagccgcatcgagctgctgccctgccggaccgcc
agggaccacctcgcccaatcagagatggcgaagcgcgtggcgaacatcctgcgggtcgtg
ctgagcctgcagcagggcgacggcgccgccgacccgctcagcatcccgctggcccagctg
gcgccgcacatcagccggctgcccatgccggaggactacgctctggaggagctgcgcggc
ctgacccagtcctacctgcggcagctcgtcgtcagccagtga
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integrated database retrieval system
