KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129370899
Entry
129370899         CDS       T09758                                 
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
  KO
K10739  replication factor A2
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030  DNA replication
pprl03420  Nucleotide excision repair
pprl03430  Mismatch repair
pprl03440  Homologous recombination
pprl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129370899 (rpa2)
   03420 Nucleotide excision repair
    129370899 (rpa2)
   03430 Mismatch repair
    129370899 (rpa2)
   03440 Homologous recombination
    129370899 (rpa2)
   03460 Fanconi anemia pathway
    129370899 (rpa2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pprl03032]
    129370899 (rpa2)
   03400 DNA repair and recombination proteins [BR:pprl03400]
    129370899 (rpa2)
DNA replication proteins [BR:pprl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    129370899 (rpa2)
DNA repair and recombination proteins [BR:pprl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     129370899 (rpa2)
   MMR (mismatch excision repair)
     129370899 (rpa2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     129370899 (rpa2)
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon TFA2_Winged_2 Irp3-like_C Arm-DNA-bind_4
Other DBs
NCBI-GeneID: 129370899
NCBI-ProteinID: XP_054903137
LinkDB
Position
Unknown
AA seq 293 aa
MLDTSTTGNARQKQRRGFKGGYSESGMVGGYTQSPGGFASPSLSQGGEKKGRTRATQIIP
CTVSQLMSASQVDEVFRVGDVEVTQVTIVGIIRSTDKSMTNIQYKVDDMTGAPMDVKQWV
DTEDPSVDSTVLPPGTYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHILEVVHAHMA
LSKPQTMPGIGGGMAVNSMPMLQQGPGMTAGSYAGTNENPLMVINGLSGNQNQVLSLIKG
CPDPQGISIQDLKQRLSGISLAVIKQAVEFLSNEGHIFSTIDEDHYKSTDNDD
NT seq 882 nt   +upstreamnt  +downstreamnt
atgttggacacctcgacaacgggaaacgctcggcaaaagcaaaggagaggttttaaagga
ggatacagcgagtctgggatggtagggggctacactcagtccccgggaggctttgcatct
ccttccctgtctcagggtggagagaagaaagggaggacccgggccacacaaataatcccc
tgcacagtgtcccagctgatgtccgcctcacaggtcgatgaggtcttcagagtgggagat
gtggaagtgacacaggtcaccattgtgggcatcattagaagtacagacaaatctatgacc
aatatccagtacaaggtggacgacatgactggcgctcctatggacgtgaagcagtgggtc
gacacagaggacccaagtgtggacagcacagtgttgcccccaggaacctatgtgaaagtg
tcaggaaatctacggtcctttcagaaccacagatctgttgtggcattcagcgtcaggccc
ctggaggacatgaatgaaattacatcgcacattttggaggtcgttcatgcgcacatggcg
ctcagcaaacctcaaacgatgccaggtattggtggaggaatggctgtaaacagcatgcca
atgctccaacaaggcccggggatgaccgcagggagctacgcaggcaccaatgagaaccca
ctaatggtcataaatgggttaagtgggaatcagaaccaggtgctgagtttgataaaaggc
tgtccggaccctcagggtattagcattcaggatctgaagcaaaggctcagcggcatcagt
cttgcagtgatcaaacaagcagtggagttcctgagcaatgaaggccacatcttttcaacc
atagacgaggatcactacaaatcaacagacaatgatgactaa

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