Poeciliopsis prolifica (blackstripe livebearer): 129371100
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Entry
129371100 CDS
T09758
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129371100 (khdc4)
Spliceosome [BR:
pprl03041
]
Complex B
Other components
Prp19-related factors
129371100 (khdc4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
129371100
NCBI-ProteinID:
XP_054903459
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All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MSFCGTQNSGRRSKWDQPVAGTGGSGGMREAEAAPCGALDAAAAVAAKINAMLVAKGKLK
PSQISSPLPSDKIVGAGKPPAPTKAKDDLVVAEVEINDVPLSCRNLLTRGQTQEEISKVS
GAAVSTRGRYMTADEKNKALLGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATAS
SAAPSFSPSGASVTVYQQHNPPGPSLPPATNHKPHFQSGMHYVQDKIFVGLEHAVPGFVV
KERVEGPACSYLQHIQAETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAA
KTLCENLLLTVHAEYSRYLSQMNTMMPTQQGFSQPPVVNGIPPQPPYYPPAGFQPSYSVP
APPPQPQPVPPTYTVPPPVPPVMPAGVPSQYPIRQRSAPLPAPIPVPVAVSIPAPTLAPV
PAPIMAPIPTSAPDSLHQTLPPLHFAPPAAAPPKLPLQAAQINPPQKRRFTEEVPDERDS
GLLGYQHGPIHMTNLGAGFSVGSTETSGPAQQSSSGPASERNSRHMMPPPTSLRVNGVSH
QMEERRLHQGFVEPPVKRLRSGLVAYSGDSSDEEEDHPSSKASWLGNHGAGNHPPTSTAS
SWAQGYRGPPPLPTRAKTQPQQQSIPFWMAP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttgtggaacccaaaacagcgggcgccgcagcaagtgggaccagcccgtggct
gggactggaggctccggcgggatgagggaggctgaggctgcgccttgcggggctctggac
gctgcagcggccgtggctgccaagatcaacgcgatgctggtggccaaagggaaactcaaa
ccgtctcaaattagctccccgctgccgtctgacaagattgttggtgctgggaagcctcct
gccccaacaaaagccaaagatgacctggtggtcgccgaagtcgagatcaacgacgtccct
ctatcttgtcgaaatctcctcacacgcggacagacacaggaggagatcagtaaagtgagc
ggagctgcagtttcaaccagagggcggtacatgacagcagatgaaaagaacaaagcattg
ttgggggaccgacctttgtatctgcatgttcaaggacagacaagagagcttgtcgacaga
gcagttaatagaatcaaggaaatcataactaacggtgtcgtaaaagccgcaacggcttca
tcagcagctccatctttctcccccagtggagcctcagtcaccgtctaccaacaacacaac
ccacctggaccttcactgcccccggcgacaaaccacaaacctcactttcagtcagggatg
cattatgttcaggataagatctttgtgggcctggagcacgccgtccctgggttcgtggtc
aaagagcgagtggagggccccgcctgctcctatctgcagcacattcaggccgagactggg
gccaaagttttcctccgaggaaaaggatcgggctgtttagagcccgcatctggacgcgag
gcttttgaacccatgtacatttacattagtcatcctaaacctgaaggactggctgcagcg
aaaaccctgtgtgagaatctccttctgacggttcatgcagagtactcccgctaccttagt
caaatgaacacaatgatgccaacgcaacaagggttttcacagcctccagtagtgaatggg
attccccctcagccgccttactatcctccagctggattccagccgagctacagcgtgcct
gccccaccgccgcagccccaacctgtcccacctacctatacggtcccacctcctgtacct
ccagtcatgcctgccggtgtgccatctcagtaccccatacggcaaagatccgcccctctt
cctgcgcccattcctgttcctgttgctgtttccatccctgctcctactctggcgcctgtc
cctgctcccattatggctcccattcccacttcagctccagactctctgcatcagactctt
cctcctctacatttcgctcctcctgctgcggcgcctcccaagctgccgctccaagccgcc
cagatcaacccgcctcagaagagacgcttcacagaggaagtaccggacgagagggacagc
ggcctgctcgggtaccagcatggacccattcatatgactaatttaggtgcaggcttctca
gtgggcagcacagagacttcaggacccgcacagcagagttcctctggcccggcgagtgag
aggaacagtcggcacatgatgcctccaccaacatccctgcgtgtgaacggagtgagtcac
cagatggaggagaggagactacatcaaggctttgtggagccgccagtgaaaagactgaga
tccggtttagttgcgtactccggcgactcgtctgacgaagaggaagaccacccttcgtcc
aaagcttcgtggcttggtaaccatggggcaggtaaccacccacccacctctactgcttca
agctgggctcagggctaccgcggccctccgcctctgccgactcgtgccaaaacgcagcca
cagcagcagtccattcctttctggatggcgccatga
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