Poeciliopsis prolifica (blackstripe livebearer): 129371151
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Entry
129371151 CDS
T09758
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03320
PPAR signaling pathway
pprl04148
Efferocytosis
pprl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129371151 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129371151 (rxrbb)
03320 PPAR signaling pathway
129371151 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129371151 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129371151 (rxrbb)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129371151 (rxrbb)
Nuclear receptors [BR:
pprl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129371151 (rxrbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
129371151
NCBI-ProteinID:
XP_054903539
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSAPQPNSSASNSPTNFIGSPFSVISPSLSSPVVSPSLGFGPISSSQISSSAPISGMHSV
SSSEDIKPPFGLRPMQAHSPGIMMSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVNPIKWKNKDGKDEGWMTVQE
ERQRNREREGELEFSSGVNDEMPVEKILEAEMAVDMRIDLHSDRGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASEL
QRDSAHMAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSSTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacctcaacctaatagctcagcctccaacagcccaaccaacttcataggttct
cctttttcagtgataagtccttctctcagctctccggtggtatctccctctctgggattt
ggacctatcagcagtagtcagatttcgtcttcagcaccaatatcagggatgcattcagtc
agcagctcagaagatattaagcctccatttggcctgaggcccatgcaagctcacagcccg
ggaataatgatgtctcagaaacgactgtgtgtgatctgtggtgaccgctcttctggcaaa
cactacggtgtgtacagctgtgaggggtgcaaaggtttctttaaacgaactgtgcgcaaa
gacctgagctacacctgcagggacaacaaggagtgcctggtggacaaacgccagcgcaac
cgctgccagtactgccgctaccagaaatgcctggccatgggtatgaagagagaagcggta
aatcctataaagtggaaaaacaaggatggaaaagatgagggatggatgacggttcaggag
gagcgccagaggaacagagagcgcgagggagagctggagttcagctccggagtgaacgac
gagatgcctgtggagaagatcttggaggcggagatggcggtggatatgcggattgatctg
cactcagacagagggtctgcaggaaactctccccatgatgctgtttccaacatctgccag
actgctgacaagcagctgtttgctttggtggagtgggcaaagagaatccctcatttctcc
gagctgccccttgatgatcaggtcatcctcctgcgtgcaggatggaatgagctcctgatt
gcctcgttctcccatcgctccattcctctgaaggatggcgctctgctggcgtccgagctg
cagcgtgacagcgcccacatggccggagttggtgctatttttgatagggagagtgtgcag
agtgcagaagttggtgccatatttgacagagttcttactgagcttgttaacaaaatgaga
gatatgcaaatggacaaaacagagctgggctgtctccgggctattgtcctgtttaaccca
gatgctaaagggctctccagcacaagtgaggtggagctccttagagaaaaagtctatgca
tcactggaagcttactgcaagcagaagtatccagagcagcagggaaggtttgctaagctc
ctccttcgacttccagcgctgagatccattggcttgaagtgcttggagcatctttttttc
ttcaaactgattggggacacgcctatcgacaccttcctcatggaaatgcttgaagctccc
catcagttgtcttag
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