Poeciliopsis prolifica (blackstripe livebearer): 129371253
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Entry
129371253 CDS
T09758
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129371253 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprl01007
]
129371253 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129371253 (vars1)
Enzymes [BR:
pprl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
129371253 (vars1)
Amino acid related enzymes [BR:
pprl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129371253 (vars1)
Transfer RNA biogenesis [BR:
pprl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129371253 (vars1)
Prokaryotic type
129371253 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
129371253
NCBI-ProteinID:
XP_054903728
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALVAAEFCPSSRPRIISEDPPASLNARSRPALALPAAGDGDSV
LSGASAVAWYLAFQGKRAGVDSKQQSQVWQWLSFADNELTPVSCAVVFPLMGVMGVDKKL
QQSSRAELMRVLKVLDLALAPRTFLVGESLTLADMAVATAILLPFKYALEPSDRKAVTNV
TRWFTTCINQPQFLKVLGEIALCEKVGPVTPAPKAAEKTANVAVDSNNSAANGPPKTEAQ
LKKEAKKREKLEKFQQKKEMEAKKKTQPAAEKKAKPEKKELGVITYNIPTNPGDKKDVIS
SLPDSYSPQYVEAAWYPWWEKQGFFKPEFGRKSISESNPRGVFMMCIPPPNVTGSLHLGH
ALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLKREKGLSRHDLGRENFIQ
EVWKWKNEKGDRIYHQLKKLGSSLDWDRSCFTMDQKLSYAVQEAFIRMHDEGVIYRSKRL
VNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIVATT
RIETMLGDTAVAVHPADLRYQHLKGKAVLHPFCERKMPIVFDDFVDMNFGTGAVKITPAH
DHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARTAVLQALKDRGQFKEIKDN
PMVVPVCSRSKDIVEPLLKPQWYVNCREMGKQAADVVREGKLKIIPDHHLKTWFNWMDNI
RDWCISRQLWWGHRIPAYFVTINDPTVKPGEDMDGHYWVSGRSEEEAKEKAAKRFNVSVD
QISLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARMVMM
GLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLTDSNLDP
VEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNA
VKFAMKTLGDNFVPSEKAQLSGEESVADRWILSRLSAAVALCDSGFKAYDFPAITTAVYN
FWLYELCDVYLESVKPVFIKADEDSATQRQAAVCRQTLYTCLDVGLRLLSPLMPFVTEEL
YQRLPRRKPQTDPPSICVTSYPDTAEFCWNSEEIDRDMEFTMTVVKTIRSLRADYNLTKT
RADCYLQCIDAATVSLLQKYSLQIQTLSYSQAVIPLTADQPVPEGCAVAIASDRCTVNLM
LKGLIDVEKEVTKLMTKKGDLEKQMEKLREKMAKNDYKEKVPAKVQEQDAEKLRQSQTEL
QKVTEAIENFKKMM
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctctacgtgtcacctcaccccgatgacttcaggagtctgctggctctcgtc
gctgctgagttttgtccatcatctcgtcctcggatcatctcggaggatccgccagcttcc
ctgaatgcccgctccagacccgccctggccctgcccgctgccggggacggggactctgtc
ctgagcggggccagtgctgtggcatggtacctggcttttcaggggaagagagctggcgtg
gattcaaagcaacagagccaagtgtggcagtggctcagcttcgcagacaacgagctcacc
ccggtttcctgtgccgtggtcttccctctgatgggagtgatgggcgtagataaaaagctg
cagcagagttcacgggcagaactcatgcgggttctaaaggttctggatctggccttggca
ccgagaactttcctggtgggagagagcctcactctggctgacatggccgttgctacagct
attcttctgccgttcaaatatgcattggagccttcagacaggaaggcagtgaccaacgtg
accagatggttcacaacctgcatcaaccagcctcagttcctgaaggtgctgggagagatc
gctctttgtgagaaagtgggaccagtaacaccagcaccgaaggctgctgaaaaaactgca
aatgtcgctgtagactccaataattctgctgctaatggtccaccaaagacagaggcacag
ctgaaaaaggaagcaaagaagagagaaaaactggaaaagtttcaacagaagaaggaaatg
gaggcaaagaaaaagacacaacctgcagcagagaaaaaggcaaaacctgaaaagaaagag
cttggagtgattacatacaacattcctacaaaccctggagacaaaaaagacgtcatcagt
tcgcttcctgactcgtacagccctcagtacgtggaggctgcctggtatccatggtgggag
aagcagggctttttcaaacctgagtttggtaggaagagcatcagtgagtcgaatcctcgt
ggcgtcttcatgatgtgcatccctcctccaaacgtgaccggatctcttcacctgggtcac
gctctcaccaacgccattcaggattgtttgaccagatggcacaggatgcggggggaaacc
acactgtggaacccgggctgtgaccacgccggcatcgcaacgcaagtggtggtggagaag
aagctgaagagagagaaaggtctgagccgccacgatctgggcagggagaacttcatccag
gaagtttggaaatggaagaacgagaagggagaccgcatttaccaccagctgaagaagctg
ggctcctctctggactgggacagatcgtgcttcaccatggaccagaaactgtcctacgca
gtgcaggaggccttcatccgcatgcatgacgaaggagtgatttacaggagcaagaggctc
gtcaactggtcctgcacactgaactccgccatctctgacatagaggtggataaaaaggag
ctcagtggcagaactctgctccctgtgcccggctacaaggagaaagtcgagttcggggtc
ttggtgtcctttgcttacaaggtggatggatcagatgaggaagtgatcgtggccacaacc
cgtatcgagacgatgttgggagacactgcggtggcggtccacccggctgacctcaggtac
cagcatctgaagggaaaagccgtgttgcatcccttctgcgagcgcaagatgccgatagtc
tttgacgactttgtggacatgaattttggaaccggtgctgtcaaaatcaccccagctcac
gaccataatgactacgaggtcggagagagacacaatctggccttcatcaacatcctggat
gaaaatgggctgctcattaatgtgcctcctcccttcctgggcatgaagcgattcgaggcc
agaacagcagtcctgcaggcactgaaggacagaggccagtttaaagagatcaaagacaac
cccatggttgtgcccgtctgcagccgttcaaaggacatcgtggagccgctgctgaagcct
cagtggtacgtcaactgcagagaaatgggcaaacaggctgcagacgtcgtgagggaaggg
aagctcaagatcatccccgatcaccacctgaagacgtggttcaactggatggacaacatt
agagactggtgtatctccaggcagctgtggtggggtcaccgtattcctgcctatttcgtc
accataaatgatcccactgtgaaacccggcgaggacatggatggtcattactgggtaagt
ggcagatcagaggaggaggccaaagaaaaagcagcaaaacgcttcaatgtgtctgtggat
caaatttccctccggcaggacgaggatgttctggacacttggttctcgtctggcattttc
cccttctctattttcggatggcctaatgagacccaggacctgaacgtgttctaccccggc
accctgctggagacgggtcacgacatcctgttcttctgggtagcccgcatggtgatgatg
ggcctgaaactgacgggcaagctgccctttaaagaggtttatctgcacgccgtggtgcgg
gacgcccacgggaggaagatgagcaaatccctcgggaatgtcatcgacccgctggacgtc
atcaccgggatttccctggagggtcttcacgcccagctgacggacagtaacttggatcct
gtagaggtggagaaggcgaagcaaggccagaagtcagactatccaaacggcatcccagaa
tgcgggacagatgctctccgcttcgcattgtgtgcctacaccagccaaggaagggacatc
aacctggatgtcaaccgcatcctggggtaccgtcacttctgcaacaaactgtggaacgct
gtgaagtttgcaatgaaaacactcggagacaactttgttccctcagaaaaagcccagctg
tctggagaggagagcgtggcagacaggtggatcctgtccaggctcagtgcggctgtagct
ctgtgtgactctggcttcaaggcctacgacttcccagccatcaccaccgccgtctacaac
ttctggctctatgagctctgtgacgtctacctggaaagtgtgaagccggtgttcattaaa
gcagacgaagacagcgccacccagaggcaagccgcagtatgcaggcagaccctctacacc
tgtttggacgtgggtttgcggcttctttcccccttgatgccgttcgtcactgaggaactc
taccagaggttaccgcgacggaaacctcagaccgatccacccagcatctgcgtcacgtcc
tacccagacaccgcagagttttgctggaacagcgaagagatcgaccgcgacatggagttc
accatgacggtggtcaagacgatccgatctctgagggccgactacaacctgacgaagacc
agagccgactgctacctgcagtgcatcgatgctgcaaccgtgtctctgctgcagaaatac
agcctgcagattcagaccttgtcttactctcaggccgtcatccctctgacagccgaccag
ccggtcccagaaggctgcgctgtggctatcgcttctgacagatgtactgtcaacctcatg
ctcaagggtctcattgatgtggagaaggaagtgactaaactgatgacaaagaaaggtgac
ttggagaaacagatggagaaactgagggagaagatggcgaagaatgattacaaggagaag
gtgccggcgaaggtgcaggagcaggatgcggagaagctgcgccagagccagacggagctc
cagaaagtgacagaagccatagaaaatttcaagaaaatgatgtaa
DBGET
integrated database retrieval system
