Poeciliopsis prolifica (blackstripe livebearer): 129371382
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Entry
129371382 CDS
T09758
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129371382 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129371382 (u2af2a)
Spliceosome [BR:
pprl03041
]
Complex A
U2 snRNP components
U2 related factors
129371382 (u2af2a)
Complex B
129371382 (u2af2a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
129371382
NCBI-ProteinID:
XP_054903928
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDKAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTTINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFTSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgacgagtttgagagacagttgtctgaaaacaagcaagcggaaagggac
aaagagaaccgccaccaccgccgctcctcgtcccgcagccgcagcagagagaggaaacgg
aggagcagagacagggacagacgcagcagggaccgccgtggagacagtaaggagcgaaga
cacaggcgcagctcaccatccagctacccccaagacaaagctggaagccgttctcctcat
cgtgagaagaagaagaaggtgaagaagtactgggatgttcctccaccgggttttgaacac
atcactcccatgcagtacaaagccatgcaagcggccggacagatcccagccacggccctg
ctgcccaccatgaccccagatggcctggctgttacccccaccccagtgcctgtggtgggc
agtcagatgacccggcaggctcgccgcctctatgtgggcaacatcccatttggcatcaca
gaggaatctatgatggacttttttaatgctcagatgcgtttggggggtctgactcaggcc
cctgggaatcctgtgcttgcagtacagatcaaccaggataagaactttgccttcctggag
ttccgttcggtggatgaaacaacacaggcgatggcctttgatggcatcatctttcaaggc
cagagcctgaaaatccgccgcccgcacgattaccagcctctgcctggcatgagcgagaac
cccagtgtctatgtgccgggtacacagacaattaatggtgtggtgtccacagtggtgcca
gattcggctcacaagctctttataggtggtttgccaaactacctgaatgatgaccaggtg
aaggaactgttgacatcatttggcccgctgaaggcctttaatctggtgaaagacagcgcc
acaggcctgtctaaaggatacgctttctgtgaatatgttgacgtcaacttgaatgatcag
gctattgccgggctgaacggcatgcagctgggagacaagaagctcctggtgcagagagcc
agtgtgggctccaagaacgccactctgacaaccataaaccagacgcctgtgacgctgcag
gtaccgggtctgaacagctctgtgactcagatgggtggcctgcccaccgaagtgctgtgt
ctgatgaacatggtggccccagaggagctcctggatgacgaagaatatgaggagatcgtg
gaagacgtgagggaggagtgcagcaagtacggccaagtcaagagcatcgagatccctcgc
cctgtggacggcctggaggtgcccgggaccggcaagatctttgtggagtttacttcagtt
tttgactcccagaaggccatgcaggggctgacaggaaggaagtttgccaacagggtggtc
gtgacaaaatactgcgatccagatgcttatcaccgccgggacttctggtag
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