Poeciliopsis prolifica (blackstripe livebearer): 129371551
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Entry
129371551 CDS
T09758
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129371551 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129371551 (rad54b)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129371551 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
129371551
NCBI-ProteinID:
XP_054904155
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVPPGAFASYPAEESKPLAPKLGLGNALDKVQRSLSAAVLN
KSTCSGQGQTGQTASGLSKVLARVLTATESKENEDEAKYEDCIEDVNFSAGVDGGPQWTH
TSPQTPQPPADSPRASAAAGPDGARYFSVVWCKASKKKHKRWEGDAVLVARGRTVVLKDM
EGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIVSAEDFAKGRCFQEVQTDQEELH
AKAAPPPPRSFNPKPFCPPTMLGRAGHPQNKPQVEQTRKPHHDPLAPGALVMPRPSSNHQ
WLHNKSGLPVVDVVVDPHLTAHLRPHQREGMLFLYECVMGMRAAGRHGAILADEMGLGKT
LQSVALCWTVLKQGPYGGKPVAKRILVVTPGSLVQNWRAEFTKWLGRERISVFTVDQDHR
IEEFLSSPLHSVLVISYEMLLRCLEQIRKVEFGLIICDEGHRLKNSSIKTSSALSSLSCH
RRVILTGTPVQNDLQEFYAIIDFVNPGILGSITAYRKVYEEPILHSRQPSCSEDEKVLGE
ERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCMPSPLQQKLYKHLLCHRVFRDCLQ
GFTQGSAHLACITAVKKLCNHPGLLHNTVKERTERGSVESSLYEGLADLFPESYCSAGFD
TADSGKLLVLSDLLSAIRQLSPSDRVVLVSNYTQTLDLLQDLCVRSGFTFCRLDGQTPTS
QRQRLVDAFNSPYSQSFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRD
GQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKAAEHTSFSTSELRDLFSLTD
TPCLTHDLLSCSCSMDGSVNDMGVEEVELVSDRPCQLGRQGDRRGAAQKHLSMSELMQWR
HFSGDTHTFSDPYLDHARSHITFAFQTTISHTPSEQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttcaggagctcccagtcagcttttgggtaatgctgtgaaaaaacctcgcttt
gtgccaccaggagcatttgcttcatatcctgcagaagaatcaaagcctctagcccctaaa
cttggcttgggaaatgctctggataaagtccagagaagtctttcagcagcggttctgaat
aaatcaacctgcagtggtcagggtcaaacaggccagactgcttcaggtttgtccaaggtg
ctggcccgagttctcactgcaacagagagtaaagaaaatgaggacgaggcaaaatatgaa
gactgtatagaggacgtaaatttttctgcaggagtagatggaggcccccagtggacccac
acatctcctcaaacccctcagcctcccgcagattcacctcgtgcctctgcagctgcaggc
cccgatggagcccgatacttcagtgtggtttggtgcaaagccagcaagaagaaacacaag
cgctgggagggagacgccgtgctggttgccagagggcgaacagttgtactcaaagacatg
gaggggaaggatattggaaagggtagtggctacaaggtgtcagagttggcctcgctgtct
gagggagagacgctgatgatcggagggaaggagatagaggtgatgggcatcgtctctgct
gaggactttgccaaaggtcgttgtttccaggaggttcaaactgatcaagaggaactgcac
gctaaggctgctccacctcctcctcggagcttcaaccccaaacctttctgccccccaaca
atgttgggcagagcaggacatccacaaaataaaccacaagtggagcaaaccagaaaacct
catcatgacccgctagctccaggtgccttagtgatgcctcgcccctcttccaaccaccag
tggcttcataacaagtcaggccttcctgtggtcgacgtcgtcgtcgacccacacctgact
gcacacctgcgaccccaccagagggagggcatgctcttcctctacgagtgtgttatgggc
atgagagctgcaggacgtcatggcgccatcctggcggacgagatggggcttgggaagact
ctgcagagcgtggcgctctgctggacggtgcttaagcagggaccttacggcgggaaacca
gtcgcaaagcgcatccttgtggtcactcctggcagcctcgtgcaaaactggagagcagag
ttcaccaagtggctcggccgggaacggatcagcgtcttcactgtggatcaggaccacagg
atagaggagtttttatcctcccctctccacagcgtcctggtgatcagctatgagatgctg
ctgcggtgcctggagcagatccggaaagtggagtttggtctcataatttgcgatgagggt
cacagactgaagaacagcagcatcaaaacgtcctccgccctcagcagcctcagctgtcac
cgcagagtcatactcacagggaccccggtccaaaatgacctgcaggagttttatgccatc
atagactttgtgaacccaggaattcttggttcgatcactgcttatagaaaagtttatgaa
gaaccaattctacactccagacagccgtcctgctctgaggacgagaaagttttgggggaa
gagcgcgctgctgaactctctcgtctcaccgggatgttcatcctgcggcggacgcaggag
atcatcaaccgctacttgccgcctcgtctggactggaccttgttctgcatgccgtcgccg
ctgcagcagaagctgtacaagcacctgctctgccaccgcgtcttcagagactgcctgcag
ggcttcacacaaggcagcgcccacctggcctgcatcactgcagtgaagaagctctgcaac
catcctggcttgctccacaacaccgtcaaggagagaacagagcgcggatctgtggagagc
tctttgtacgagggacttgcagatcttttcccagaatcctattgctcagcaggattcgac
actgctgactccgggaaacttttagttctgtccgacctgctgagtgccatcagacagctc
agcccttcagaccgggtggtcctggtgtcaaactacactcagacgttggacttgcttcag
gacctgtgtgttcgatccggcttcacgttctgccggctcgatggtcagacgcccacgagc
cagcggcagcggctggtcgacgccttcaacagcccctattctcagagcttcctgtttctg
ctgagctccaaagcaggcggcgtggggctgaatctgattggagcgtcgcacctggtgctg
tacgacatcgactggaaccctgccaatgacattcaggccatggctcgggtatggagagat
ggacagaaaaagacagtgcacatttatcgtctcctcactgcaggcactattgaggagcgt
atatttcagagacaggtgtccaaacaggggctgtcggggactgtggttgacctggggaaa
gcagcagaacacacaagcttctccaccagcgagctgcgagatcttttcagcctgacggac
acgccgtgtttgacccatgacctgctgagctgcagctgcagcatggacggctcggtcaac
gacatgggggtggaggaggtggagcttgtttctgacaggccgtgccagctcggtcgtcag
ggcgaccgcaggggggcggcacagaagcatctcagcatgtcggagctcatgcagtggaga
cacttctccggtgacacacacaccttctcagacccttacctcgatcacgcacgaagccac
atcaccttcgccttccagaccaccatctcccacacacccagcgaacagtga
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